DRSC/TRiP Functional Genomics Resources

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Protein Alignment lab and HAT1

DIOPT Version :10

Sequence 1:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_193476.1 Gene:HAT1 / 827457 AraportID:AT4G17460 Length:282 Species:Arabidopsis thaliana


Alignment Length:293 Identity:63/293 - (21%)
Similarity:105/293 - (35%) Gaps:76/293 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   348 MNRQQRGGVISPGSSTSSSTSASNGAHPASTQSKSPNHS--SSIPTYKWMQLKRNVPKPQAPKLP 410
            |.::..|..:|.|.:.:         ||.....| |..|  |::..:.|.|.             
plant     3 MGKEDLGLSLSLGFAQN---------HPLQLNLK-PTSSPMSNLQMFPWNQT------------- 44

  Fly   411 ASGIASMHDYQMN---GQLDMCRGGGGGGSGVGNGPVGVGGNGSPGIGGVLSVQNSLIMANSAAA 472
               :.|..|.|..   .::|           |.:.|..|......|:    |..||.|.:..:..
plant    45 ---LVSSSDQQKQQFLRKID-----------VNSLPTTVDLEEETGV----SSPNSTISSTVSGK 91

  Fly   473 AGSAHPNGMGVGLGSGSGL-------SSCSLSSNTNNSG------RTNFTNKQLTELEKEFHFNR 524
            ..|....|...| |.|..|       ||...|....:.|      :...:..|...||..|..:.
plant    92 RRSTEREGTSGG-GCGDDLDITLDRSSSRGTSDEEEDYGGETCRKKLRLSKDQSAVLEDTFKEHN 155

  Fly   525 YLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRVKEGLIPADILTQHSTSVISEKPPQQQQPQ 589
            .|...:::.:|..|.|...||::||||||.:.|  :|:..:..:.|.:     ..||..::.:  
plant   156 TLNPKQKLALAKKLGLTARQVEVWFQNRRARTK--LKQTEVDCEYLKR-----CVEKLTEENR-- 211

  Fly   590 PPELQLKSQGSDLGGNELAT---GAPSTPTTAM 619
                :|:.:.::|...:|:.   |..|.|||.:
plant   212 ----RLEKEAAELRALKLSPRLYGQMSPPTTLL 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
labNP_476613.1 Homeodomain 505..558 CDD:459649 16/52 (31%)
HAT1NP_193476.1 HD-ZIP_N 8..98 CDD:461370 24/130 (18%)
HOX 134..188 CDD:197696 16/53 (30%)
HALZ 190..233 CDD:128634 8/53 (15%)

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