DRSC/TRiP Functional Genomics Resources

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Protein Alignment lab and HAT3

DIOPT Version :10

Sequence 1:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_191598.1 Gene:HAT3 / 825210 AraportID:AT3G60390 Length:315 Species:Arabidopsis thaliana


Alignment Length:326 Identity:70/326 - (21%)
Similarity:118/326 - (36%) Gaps:75/326 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   341 SVSPNGGMNRQQRGGVISPGSSTSSSTSASNGAHPASTQSKSPNHSSSIPTYKWMQL----KRN- 400
            |:|.:.|.|::.....::|....|.::|    :|....|..:.||...|.. .|:.:    :|| 
plant    11 SLSLSLGFNQKDPSSRLNPMPLASYASS----SHMQHMQQSNYNHPQKIQN-TWINMFQSSERNS 70

  Fly   401 -----VPKPQAPKLPASGIASMHDYQMNGQLDMCRGGGGGGSGVGNGPVGVGGNGSPG--IGGVL 458
                 :......:.|::.:..:.|               .|:||          .||.  :..|:
plant    71 DMRSFLRGIDVNRAPSTVVVDVED---------------EGAGV----------SSPNSTVSSVM 110

  Fly   459 SVQNS---LIMANSAAAAGSAHPNGM---GVGLGSGSGLSSCSLSSNTNNSGRTNFTNKQLTELE 517
            |.:.|   |:.|..|...|....|.:   ...||.||.....|.:.:.::..:...:.:|...||
plant   111 SGKKSERELMAAAGAVGGGRVEDNEIERASCSLGGGSDDEDGSGNGDDSSRKKLRLSKEQALVLE 175

  Fly   518 KEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQK-----------KRVKEGLIPADILT 571
            :.|..:..|...:::.:|..|.|...||::||||||.:.|           ||..|.|...:...
plant   176 ETFKEHSTLNPKQKMALAKQLNLRTRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTDENRRL 240

  Fly   572 QHSTSVISE-----------KPPQ--QQQPQPPELQLKSQGSDLGG---NELATGAPSTPTTAMT 620
            |...|.:..           |||.  ...|....:.:.|..|.:..   |..:...|.:|..||.
plant   241 QKEVSELRALKLSPHLYMHMKPPTTLTMCPSCERVAVTSSSSSVAPPVMNSSSPMGPMSPWAAMP 305

  Fly   621 L 621
            |
plant   306 L 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
labNP_476613.1 Homeodomain 505..558 CDD:459649 17/63 (27%)
HAT3NP_191598.1 HD-ZIP_N 19..118 CDD:461370 22/128 (17%)
Homeodomain 161..215 CDD:459649 16/53 (30%)
HALZ 217..260 CDD:128634 6/42 (14%)

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