DRSC/TRiP Functional Genomics Resources

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Protein Alignment lab and HB20

DIOPT Version :10

Sequence 1:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_186771.1 Gene:HB20 / 821232 AraportID:AT3G01220 Length:286 Species:Arabidopsis thaliana


Alignment Length:52 Identity:21/52 - (40%)
Similarity:29/52 - (55%) Gaps:0/52 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   511 KQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRVKE 562
            :|:..|||.|.....|...|:|::|..|.:...|:.|||||||.:.|.|..|
plant    94 EQVKALEKSFELGNKLEPERKIQLAKALGMQPRQIAIWFQNRRARWKTRQLE 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
labNP_476613.1 Homeodomain 505..558 CDD:459649 18/46 (39%)
HB20NP_186771.1 Homeodomain 87..140 CDD:459649 18/45 (40%)
HALZ 142..183 CDD:460477 2/4 (50%)

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