DRSC/TRiP Functional Genomics Resources

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Protein Alignment lab and HB6

DIOPT Version :10

Sequence 1:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_565536.1 Gene:HB6 / 816775 AraportID:AT2G22430 Length:311 Species:Arabidopsis thaliana


Alignment Length:131 Identity:32/131 - (24%)
Similarity:53/131 - (40%) Gaps:27/131 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   512 QLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRVKE---GLIPA------ 567
            |:..|||.|.....|...|::::|..|.|...||.:||||||.:.|.:..|   |::..      
plant    70 QVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKTQYDSLR 134

  Fly   568 ---DILTQHSTSVI---------------SEKPPQQQQPQPPELQLKSQGSDLGGNELATGAPST 614
               |.|.:.:.|::               .|:..:.......|..:..:..::...|..|.|||:
plant   135 HNFDSLRRDNESLLQEISKLKTKLNGGGGEEEEEENNAAVTTESDISVKEEEVSLPEKITEAPSS 199

  Fly   615 P 615
            |
plant   200 P 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
labNP_476613.1 Homeodomain 505..558 CDD:459649 18/45 (40%)
HB6NP_565536.1 Homeodomain 62..115 CDD:459649 18/44 (41%)
HALZ 117..158 CDD:460477 5/40 (13%)

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