DRSC/TRiP Functional Genomics Resources

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Protein Alignment lab and hmx4

DIOPT Version :10

Sequence 1:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001038836.2 Gene:hmx4 / 751654 ZFINID:ZDB-GENE-060825-142 Length:238 Species:Danio rerio


Alignment Length:82 Identity:36/82 - (43%)
Similarity:47/82 - (57%) Gaps:10/82 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   493 SCSLSSNTNN----------SGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKI 547
            ||..:...||          ..||.|:.:|:.:||..|...|||:.|.|..:||:|||.||||||
Zfish    94 SCDDAQQKNNGKKNKLMTKKKTRTIFSKRQIFQLESTFDMKRYLSSAERACLANSLQLTETQVKI 158

  Fly   548 WFQNRRMKQKKRVKEGL 564
            ||||||.|.|:::...|
Zfish   159 WFQNRRNKLKRQLSTEL 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
labNP_476613.1 Homeodomain 505..558 CDD:459649 30/52 (58%)
hmx4NP_001038836.2 Homeodomain 115..169 CDD:459649 30/53 (57%)

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