DRSC/TRiP Functional Genomics Resources

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Protein Alignment lab and hoxb5b

DIOPT Version :9

Sequence 1:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_571612.2 Gene:hoxb5b / 58052 ZFINID:ZDB-GENE-000823-6 Length:276 Species:Danio rerio


Alignment Length:321 Identity:78/321 - (24%)
Similarity:107/321 - (33%) Gaps:141/321 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   281 DSLGMHA----HMHHGLP-------HGHLGNLANNPHQ-QQPQVQQQQQQPHQQPQHP------- 326
            ||..||:    :.::|:.       :||.|.:.:|... |.|..:.:.:|.......|       
Zfish    36 DSTSMHSGSFGYNYNGIDLSVNRPNNGHFGAVGDNSRAFQNPSQETRYRQSSCSLSSPDPLSCAT 100

  Fly   327 ------QNQSPAAHQQHHQNSVSPNGGMNRQQRGGVISPGSS-------TSSSTSASNGA----- 373
                  :..||.:.|.      :|.|.........:.|..|:       |:.|:....||     
Zfish   101 SDTLELKGSSPPSDQS------TPTGNSRLTNSNNLTSSNSTHFADTDETNVSSETEEGAQTTTT 159

  Fly   374 ------HPASTQSKSPNHSSSIPTYKWMQLKRNVPKPQAPKLPASGIASMHDYQMNGQLDMCRGG 432
                  ...:|.:.:||...:...:.||:           ||..|     ||  |.|        
Zfish   160 SRTQKQESVATSTTTPNDGQTPQIFPWMR-----------KLHIS-----HD--MTG-------- 198

  Fly   433 GGGGSGVGNGPVGVGGNGSPGIGGVLSVQNSLIMANSAAAAGSAHPNGMGVGLGSGSGLSSCSLS 497
                                                         |:|                 
Zfish   199 ---------------------------------------------PDG----------------- 201

  Fly   498 SNTNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKK 558
                ...||.:|..|..||||||||||||||.||||||:.|.|:|.|:||||||||||.||
Zfish   202 ----KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
labNP_476613.1 Homeobox 505..557 CDD:278475 38/51 (75%)
hoxb5bNP_571612.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..182 21/124 (17%)
Antp-type hexapeptide 183..188 1/4 (25%)
Homeobox 205..257 CDD:278475 38/51 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.810

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