Protein Alignment lab and hoxc1a

DIOPT Version :10

• Sequence 1: NP_476613.1
• Gene: lab / 40817
• FlyBaseID: FBgn0002522
• Length: 629
• Species: Drosophila melanogaster
• Sequence 2: NP_571606.1
• Gene: hoxc1a / 58046
• ZFINID: ZDB-GENE-000822-2
• Length: 302
• Species: Danio rerio
• Alignment Length: 335
• Identity: 101/335 - (30%)
• Similarity: 122/335 - (36%)
• Gaps: 127/335 - (37%)

  Fly   284 GMHA------HMHHG----LP------------HGHLGNL-----------------ANNPHQQQ 309
            |.||      |..||    .|            ..|..||                 ||:.....
Zfish    17 GYHATGVMRLHQDHGSTADFPSREDVNNEADFLQYHFTNLCATATGACSKPCEDPGRANSTRPPF 81

  Fly   310 PQVQQQQQQPH-QQPQHPQNQSPAAHQQHHQNSVSPN--------------GGMNRQQRGGVISP 359
            ||.|...:..| .:||.|..|| ...|...:...||:              |.:|..|.......
Zfish    82 PQNQDFYRPVHPNRPQVPSFQS-CREQGLSRKGFSPSSDTFRTFSSAHCELGPVNNTQTEVRTYD 145

  Fly   360 GSSTSSSTSASNGAHPASTQSKSPNHSSSIPTYKWMQLKRNVPKPQAPKLPASGIASMHDYQMNG 424
            |....|:....|..|.|........||..  |::||:::||  :.:|.|:.. |..|..:.:.|.
Zfish   146 GPVRHSAVEDDNTGHGALNTLNETLHSGK--TFEWMRVRRN--QSRAAKIQL-GKCSDRELKTNH 205

  Fly   425 QLDMCRGGGGGGSGVGNGPVGVGGNGSPGIGGVLSVQNSLIMANSAAAAGSAHPNGMGVGLGSGS 489
            ..|.......|||
Zfish   206 GRDSDEDTSSGGS---------------------------------------------------- 218

  Fly   490 GLSSCSLSSNTNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRM 554
                           |||||.|||||||||||||:||||||||||||.|||:|||||||||||||
Zfish   219 ---------------RTNFTTKQLTELEKEFHFNKYLTRARRIEIANPLQLSETQVKIWFQNRRM 268

  Fly   555 KQKKRVKEGL 564
            ||||.::|||
Zfish   269 KQKKMLREGL 278

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lab	NP_476613.1	Homeodomain	505..558	CDD:459649	48/52 (92%)
hoxc1a	NP_571606.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	198..224		9/92 (10%)
		Homeodomain	218..272	CDD:459649	49/120 (41%)