DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lab and Drgx

DIOPT Version :10

Sequence 1:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001097075.2 Gene:Drgx / 5740176 FlyBaseID:FBgn0085369 Length:587 Species:Drosophila melanogaster


Alignment Length:527 Identity:105/527 - (19%)
Similarity:159/527 - (30%) Gaps:172/527 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 QQHLTYNGYESSSPGNYYPQQQA--QLT----------PPPTSSHQVVQQHQQQQQAQQQQLYPH 115
            :|....||..|||....:..:::  .:|          ||...||..:...|.:|  |....:.|
  Fly   116 EQRKRENGESSSSLDKLHDSRESSPDITGEIDDDMDDLPPRQRSHSPLANGQMEQ--QHSHSHSH 178

  Fly   116 SHLFSP--------SAAEYGITTSTTTGNPGTPLHPSSH--------SPADSYYESDSVHSYYAT 164
            ||..||        |..|..::::..|..|    |.:|.        ||:.|....:..|:....
  Fly   179 SHSRSPGGGMHLDSSDNERPLSSNQLTATP----HSASQSLGSISAGSPSPSGMHREREHTPLVG 239

  Fly   165 AAVATVAPPSNS----SPI---------TAANASATSNT--------------QQQQQQAAIISS 202
            ......:.||||    |||         |.:..:|:||.              |.....||..::
  Fly   240 GGGQGPSSPSNSRNTDSPIEVGGPMSLTTGSRMAASSNNSASSTPTPTTPHAPQMPHSSAAAAAA 304

  Fly   203 ENGMMYTNL---------DCMYPTAQAQAPVHGYAGQIEEKYAAVLHASYAPGMVLEDQDPMMQQ 258
            ....::.|.         :|            |:...:.|:.|....|:.|......:..|:...
  Fly   305 FGSHIFGNFGGGSNASDSNC------------GFRPVLSEQSAVAAAAAAAAAQRSANHPPLFLP 357

  Fly   259 ATQSQMWHHQQHLAGSYALDAMDSLGMHAHMHHGLPHG-----------HLGNLANNPHQQQPQV 312
            ...:..:.||....|...:....||.....:....|.|           ...:.|::|...:...
  Fly   358 PHLAAQFTHQPLFPGLKGVSPFQSLCSCCSLKPPPPPGSSVVAPLSIPVSSSSAASSPESPKSSG 422

  Fly   313 QQQQQQPHQQP-----QHPQNQSPAAHQQHHQNSVSPNGGMNRQQRGGVISPGSSTSSSTSASNG 372
            |.....|....     :..|..|.|..|..|..:.:           |:..||......:.|.  
  Fly   423 QGSVHDPRSNSVAELRRKAQEHSAALLQSLHAAAAA-----------GLAFPGLHLPPLSFAH-- 474

  Fly   373 AHPASTQSKSPNHSSSIPTYKWMQLKRNVPKPQAPKLPASGIASMHDYQMNGQLDMCRGGGGGGS 437
             |||..| ...||:::    ..|::|...                .|..|||.      |.|.||
  Fly   475 -HPALGQ-HVVNHNNN----NTMRMKHEA----------------QDMTMNGL------GPGSGS 511

  Fly   438 GVGNGPVGVGGNGSPGI-----------------------------GGVLSVQNSLIMANSAAAA 473
            |.|:|..| ||..|..:                             |||.:.:.|   ..|.|.|
  Fly   512 GSGSGSAG-GGTSSAALLDLAESAVAYQQQQHATLSPPTTPTQQSSGGVAATEGS---PGSGAIA 572

  Fly   474 GSAHPNG 480
            ||...||
  Fly   573 GSGSLNG 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
labNP_476613.1 Homeodomain 505..558 CDD:459649
DrgxNP_001097075.2 Homeodomain 53..109 CDD:459649
OAR 428..446 CDD:461067 2/17 (12%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.