DRSC/TRiP Functional Genomics Resources

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Protein Alignment lab and meox2a

DIOPT Version :10

Sequence 1:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_017206696.1 Gene:meox2a / 556898 ZFINID:ZDB-GENE-080613-1 Length:302 Species:Danio rerio


Alignment Length:326 Identity:90/326 - (27%)
Similarity:120/326 - (36%) Gaps:103/326 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   292 GLPHGHLGNLANNPHQQQPQVQQQQQQPHQQPQHPQNQSPAAHQQHHQNSVSPNGGMNRQQRGGV 356
            |.| |..|.|... ||:...|.|||.                |..||.:.::..||.:..|    
Zfish    51 GYP-GEDGGLFGG-HQRGLSVSQQQH----------------HHHHHHHHLAQQGGWHLPQ---- 93

  Fly   357 ISPGSSTSSSTSASNGAHPASTQSKSPNHSSSIPTYKWMQLKRNVPKPQAPKLPASGIASMHDYQ 421
                 |:|:|.||: |.......|...:.||.:             .|..|.|            
Zfish    94 -----SSSASPSAA-GVRLGLGISGPDSGSSDV-------------GPGGPSL------------ 127

  Fly   422 MNGQLDMCRGGGGGGSGVGNGPVGVGGNGSPGIGGVLSVQNSLIMA-----NSAAAAGSAHPNGM 481
                   |......|:||.:|...|.| |..|       ::::..|     ||...:.|:.    
Zfish   128 -------CASTPSLGAGVPSGASCVPG-GDFG-------RHTMSPAEAEKRNSKRRSDSSE---- 173

  Fly   482 GVGLGSGSGLSSCSLSSNTNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVK 546
                 |..|.....:||..... ||.||.:|:.|||.||..:.||||.||.|||..|.|.|.|||
Zfish   174 -----SQDGNYKSDVSSKPRKE-RTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVK 232

  Fly   547 IWFQNRRMKQKK----------------RVKEG-LIPAD---ILTQHSTSVISEKPPQQQQPQPP 591
            :||||||||.|:                .||:| |:|::   |...|:...:......|...|..
Zfish   233 VWFQNRRMKWKRVKGGQQGAVAREKELVNVKKGTLLPSEFSGIAGLHTPDSLLNNEDSQDSDQSS 297

  Fly   592 E 592
            |
Zfish   298 E 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
labNP_476613.1 Homeodomain 505..558 CDD:459649 33/52 (63%)
meox2aXP_017206696.1 Homeodomain 188..244 CDD:459649 33/56 (59%)

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