Protein Alignment lab and Bsx

DIOPT Version :10

• Sequence 1: NP_476613.1
• Gene: lab / 40817
• FlyBaseID: FBgn0002522
• Length: 629
• Species: Drosophila melanogaster
• Sequence 2: NP_001178924.1
• Gene: Bsx / 500982
• RGDID: 1565120
• Length: 232
• Species: Rattus norvegicus
• Alignment Length: 270
• Identity: 67/270 - (24%)
• Similarity: 94/270 - (34%)
• Gaps: 85/270 - (31%)

  Fly   374 HPASTQSKSPNHSSSIPTYKWMQLKRNVPKPQA--------------PKLPASGIASMHDYQMNG 424
            ||||:|..:......|..:|...|:...|...|              |.:|...:.:.|.:.
  Rat    10 HPASSQRPTSFFIEDILLHKPKPLREVAPDHFASSLASRVPLLDYGYPLMPTPTLLTPHTHH--- 71

  Fly   425 QLDMCRGGGGGGSGVGNGPVGVGGNGSPGIGGVLSVQNSLIMANSAAAAGSAHPNGMGVGLGSGS 489
                              |:..|.:..|           ..:|.|.....:..|:.....|..
  Rat    72 ------------------PLHKGEHHHP-----------YFLATSGMPVPALFPHPQHAELPG-- 105

  Fly   490 GLSSCSLSSNTNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRM 554
              ..|     .....||.|::.||:.|||.|...|||:...|:|:|..|.|:|||||.|||||||
  Rat   106 --KHC-----RRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRM 163

  Fly   555 KQKKRVKEGLIPADILTQHSTSVISEKPPQQQQPQPPELQLKSQGSDLGGNELATGAP-----ST 614
            |.||::::.               .::|.....|:.||          |......|||     |.
  Rat   164 KHKKQLRKS---------------QDEPKAADGPESPE----------GSPRAPEGAPADARLSL 203

  Fly   615 PTTAMTLTAP 624
            |..|..||.|
  Rat   204 PAGAFVLTEP 213

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lab	NP_476613.1	Homeodomain	505..558	CDD:459649	30/52 (58%)
Bsx	NP_001178924.1	Homeodomain	111..167	CDD:459649	30/55 (55%)