DRSC/TRiP Functional Genomics Resources

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Protein Alignment lab and NKX3-1

DIOPT Version :10

Sequence 1:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_006158.2 Gene:NKX3-1 / 4824 HGNCID:7838 Length:234 Species:Homo sapiens


Alignment Length:207 Identity:55/207 - (26%)
Similarity:75/207 - (36%) Gaps:76/207 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   401 VPKPQ---------APKLPASGIAS--MHDYQMNGQLDMCRGGG-------------------GG 435
            ||:|:         ||..|:..:.|  :.|...:|..   |.||                   ||
Human     4 VPEPRPGEAKAEGAAPPTPSKPLTSFLIQDILRDGAQ---RQGGRTSSQRQRDPEPEPEPEPEGG 65

  Fly   436 GS--GVGNGPVGVGGNGSPGIGGVLSVQNSLIMANSAAAAGSAHPNGMGVGLGSGSGLSSCSLSS 498
            .|  |..|..:..|...:|               ..|.......|..   .|||       .|..
Human    66 RSRAGAQNDQLSTGPRAAP---------------EEAETLAETEPER---HLGS-------YLLD 105

  Fly   499 NTNNSG----------------RTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKI 547
            :.|.||                |..|::.|:.|||::|...:||:...|..:|..|:|.||||||
Human   106 SENTSGALPRLPQTPKQPQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKI 170

  Fly   548 WFQNRRMKQKKR 559
            ||||||.|.|::
Human   171 WFQNRRYKTKRK 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
labNP_476613.1 Homeodomain 505..558 CDD:459649 26/52 (50%)
NKX3-1NP_006158.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..131 29/154 (19%)
Homeodomain 125..181 CDD:459649 26/55 (47%)

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