DRSC/TRiP Functional Genomics Resources

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Protein Alignment lab and Dr

DIOPT Version :10

Sequence 1:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_477324.1 Gene:Dr / 45285 FlyBaseID:FBgn0000492 Length:515 Species:Drosophila melanogaster


Alignment Length:606 Identity:139/606 - (22%)
Similarity:211/606 - (34%) Gaps:203/606 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 PHANAYDGYSTTTASAANASSYFAPQQHQPHLQLQQQQQHQHLQQPQQHLTYNGYESSSPGNYYP 81
            |.:|...|....|:|::|:.|                               |...:.|.||...
  Fly    25 PSSNTPAGNLIITSSSSNSGS-------------------------------NSGSNMSSGNMTS 58

  Fly    82 QQQAQLTP----------PPTS------SHQ--VVQQHQQQQQAQQQQ----------LYP---H 115
            .....|:|          .|||      :||  ::|||||.||.||||          ::|   |
  Fly    59 SNLTNLSPSHPAGLNALASPTSPSALLLAHQQHLLQQHQQHQQQQQQQQQAAALQLAAVHPPAHH 123

  Fly   116 SHLFSPSAAEYGITTSTTTGNPGTPLHPSSHSPADSYYESDSVHSYYATAAVATVAPPSNSSPIT 180
            .|..:...:.:.:.:......|.||.:.::..|          .:..::||.:.::..|::.|..
  Fly   124 LHKTTSRLSNFSVASLLADTRPRTPPNQAADGP----------QNLTSSAATSPISQASSTPPPP 178

  Fly   181 AANASA--TSNTQQQQQQAAIISSENGMMYTNLDCMYPTAQAQAPVHGYAGQIEEKYAAVLHASY 243
            .|:|:|  .:||                       .:|.|.|.             :|.:|.|::
  Fly   179 PASAAAQVPANT-----------------------FHPAAVAH-------------HAHLLQAAH 207

  Fly   244 APGMVLEDQDPMMQQATQSQMWHHQQHLAGSYALDAMDSLGMHAHMHHGLPHGHLGNLANNPHQQ 308
            |..........|..|..|.|    ||..|.:.:..|..| ...:....|...|..||:|:.|.:.
  Fly   208 AAAAAHAQHQAMAAQLRQQQ----QQADARANSPPASTS-STPSSTPLGSALGSQGNVASTPAKN 267

  Fly   309 QP------------QVQQQQQQPHQQPQHPQNQSPAAHQQHHQNSVSPNGGMN-----RQQRGGV 356
            :.            :..::..|.|:           |.....::|:.....||     |....|:
  Fly   268 ERHSPLGSHTDSELEYDEEMLQDHE-----------ADHDEEEDSIVDIEDMNADDSPRSTPDGL 321

  Fly   357 ISPGSSTSSSTSASNGAHPAST-QSKSPNHSSSIPTYKWMQLKRNVPKPQAPKLPASGIASMHDY 420
            ...|.|..|......|:|..|| .|.:...|..:|..         |.|.: .|.|:.:|     
  Fly   322 DGSGKSLESPHGPPPGSHMQSTILSPAALASGHVPIR---------PTPFS-ALAAAAVA----- 371

  Fly   421 QMNGQLDMCRGGGGGGSGVGNGPVGVGGNGSPGIGGVLSVQNSLIMANSAAAAGSAHPNGMGVGL 485
                           .:|:|.|....|....|..|                      |.||..|.
  Fly   372 ---------------WTGMGGGVPWPGTRQMPPFG----------------------PPGMFPGA 399

  Fly   486 GSGSGLS-----SCSLSSN-TNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQ 544
            |.|...:     .|:|..: .|...||.||.:||..|||:|...:||:.|.|.|.:::|:|.|||
  Fly   400 GFGGDANEPPRIKCNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLRLTETQ 464

  Fly   545 VKIWFQNRRMKQKKRVKEGLI 565
            |||||||||.| .||::|..|
  Fly   465 VKIWFQNRRAK-AKRLQEAEI 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
labNP_476613.1 Homeodomain 505..558 CDD:459649 30/52 (58%)
DrNP_477324.1 Homeodomain 422..478 CDD:459649 30/56 (54%)

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