DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lab and emx1

DIOPT Version :10

Sequence 1:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001005459.1 Gene:emx1 / 448058 XenbaseID:XB-GENE-920144 Length:233 Species:Xenopus tropicalis


Alignment Length:110 Identity:37/110 - (33%)
Similarity:54/110 - (49%) Gaps:26/110 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   505 RTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRVKEGLIPADI 569
            ||.|:..||..||:.|..|.|:..|.|.::|::|.|:|||||:||||||.|.|:           
 Frog   139 RTAFSPSQLLRLERAFEKNHYVVGAERKQLASSLSLSETQVKVWFQNRRTKYKR----------- 192

  Fly   570 LTQHSTSVISEKPPQQQQPQPPELQLKSQGS-DLGGNELATGAPS 613
                          |:.:.:.|:...|.:|| .:....|||..|:
 Frog   193 --------------QKLEEEGPDSDQKKKGSHHINRWRLATKQPN 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
labNP_476613.1 Homeodomain 505..558 CDD:459649 27/52 (52%)
emx1NP_001005459.1 Homeodomain 136..192 CDD:459649 27/52 (52%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 192..233 9/57 (16%)

Return to query results.
Submit another query.