DRSC/TRiP Functional Genomics Resources

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Protein Alignment lab and bap

DIOPT Version :10

Sequence 1:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster


Alignment Length:126 Identity:44/126 - (34%)
Similarity:64/126 - (50%) Gaps:25/126 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   488 GSGLSSCSLSSNTNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNR 552
            |||||       .....|..|::.|:.|||:.|...|||:...|.|:|.:|:|.|||||||||||
  Fly   169 GSGLS-------RKKRSRAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNR 226

  Fly   553 RMKQKKRVKEGLIPADILTQHSTSVI--SEKPPQQQQPQPPELQLKSQGSDLGGNELATGA 611
            |.|.|::.         :.||..:::  |::.|.|       :.::..||....:..|.||
  Fly   227 RYKTKRKQ---------IQQHEAALLGASKRVPVQ-------VLVREDGSTTYAHMAAPGA 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
labNP_476613.1 Homeodomain 505..558 CDD:459649 28/52 (54%)
bapNP_732637.1 Homeodomain 176..232 CDD:459649 28/55 (51%)

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