DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lab and ftz

DIOPT Version :9

Sequence 1:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster


Alignment Length:438 Identity:107/438 - (24%)
Similarity:161/438 - (36%) Gaps:159/438 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   259 ATQSQMWHHQQHLAGSYALDAMDSLGMHAHMH-HGLPHGHLGNLANNPHQQQPQVQQQQQQPHQQ 322
            ||.:...|:      |||    |::.|:...| |.||..:..|..:|.:.|...        :.|
  Fly     2 ATTNSQSHY------SYA----DNMNMYNMYHPHSLPPTYYDNSGSNAYYQNTS--------NYQ 48

  Fly   323 PQHPQ-NQSPAAHQQHHQNSVSPNGGMNRQQRGGVISPGSSTSSSTSASNGAHPASTQSKSPNHS 386
            ..:|| :.|.:.:..::|..|:..          .:.|...|:..        |.:|:.|:.:.:
  Fly    49 GYYPQESYSESCYYYNNQEQVTTQ----------TVPPVQPTTPP--------PKATKRKAEDDA 95

  Fly   387 SSI-------------------------PTYKWM---QLKR---------------------NVP 402
            :||                         |.|.:.   |:|:                     .||
  Fly    96 ASIIAAVEERPSTLRALLTNPVKKLKYTPDYFYTTVEQVKKAPAVSTKVTASPAPSYDQEYVTVP 160

  Fly   403 KPQAPKLPASGIASMHDYQMNGQLDMCRGGGGGG------------SGVGNGPVGVGGNGSPGIG 455
            .|.|    :..:..:..|....|....:.|....            .|:...|...|...|..:.
  Fly   161 TPSA----SEDVDYLDVYSPQSQTQKLKNGDFATPPPTTPTSLPPLEGISTPPQSPGEKSSSAVS 221

  Fly   456 GVLSVQNSLIMANSAAAAGSAHPNGMGVGLGSGSGLSSCSLSSNTNNSGRT--NFTNKQLTELEK 518
              ..:.:.::.|          ||  |.|..:.|.:.. :|:|:..:|.||  .:|..|..||||
  Fly   222 --QEINHRIVTA----------PN--GAGDFNWSHIEE-TLASDCKDSKRTRQTYTRYQTLELEK 271

  Fly   519 EFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKK-RVKEGLIPADILTQHS----TSVI 578
            |||||||:||.|||:|||.|.|:|.|:||||||||||.|| |.      .|...:|.    |:::
  Fly   272 EFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRT------LDSSPEHCGAGYTAML 330

  Fly   579 SEKPPQQQQPQPPELQLKSQGSDLGGNELATGAPSTP--------TTA 618
                        |.|:..|..:        |||||.|        |||
  Fly   331 ------------PPLEATSTAT--------TGAPSVPVPMYHHHQTTA 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
labNP_476613.1 Homeobox 505..557 CDD:278475 37/53 (70%)
ftzNP_477498.1 FTZ 1..248 CDD:281812 49/300 (16%)
Homeobox 257..310 CDD:278475 36/52 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439796
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 1 0.900 - - E2759_KOG0489
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D858478at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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