DRSC/TRiP Functional Genomics Resources

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Protein Alignment lab and CG34031

DIOPT Version :10

Sequence 1:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001246894.1 Gene:CG34031 / 3885665 FlyBaseID:FBgn0054031 Length:219 Species:Drosophila melanogaster


Alignment Length:210 Identity:53/210 - (25%)
Similarity:84/210 - (40%) Gaps:70/210 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   377 STQSKSPNHSSSIPTYKWMQLKRNVPKPQAPKLPASGIASMHDYQMNGQLDMCRGGGGGGSGVGN 441
            |..|.|..|||          :.::||... .:.:|.|:.::.:....:                
  Fly    35 SILSTSEAHSS----------QNSLPKDNT-NVTSSDISKLYAFSFTQE---------------- 72

  Fly   442 GPVGVGGNGSPGIGGVLSVQNSLIMANSAAAAGSAHPNGMGVGLGSGSGLS-------SCSLSSN 499
                 |.|.:|             :.|.....|  ||..:.:.. .||.:|       |...|..
  Fly    73 -----GNNKTP-------------LTNFDLCQG--HPRRLPITF-DGSTVSRFVWRTESILPSYI 116

  Fly   500 TNNSG------RTNFTNK---------QLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWF 549
            ||::.      |..||::         ||..||.||:.::||:.::|:|::.:|.|.|.|||.||
  Fly   117 TNSTNLQEKQLRKRFTDRKPRQAYSASQLERLENEFNLDKYLSVSKRVELSKSLSLTEVQVKTWF 181

  Fly   550 QNRRMKQKKRVKEGL 564
            ||||.|.||::...|
  Fly   182 QNRRTKWKKQLTSRL 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
labNP_476613.1 Homeodomain 505..558 CDD:459649 26/61 (43%)
CG34031NP_001246894.1 Homeodomain 134..190 CDD:459649 23/55 (42%)

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