DRSC/TRiP Functional Genomics Resources

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Protein Alignment lab and vax2

DIOPT Version :10

Sequence 1:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_919390.1 Gene:vax2 / 373869 ZFINID:ZDB-GENE-030904-8 Length:307 Species:Danio rerio


Alignment Length:277 Identity:67/277 - (24%)
Similarity:92/277 - (33%) Gaps:86/277 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   360 GSSTSSSTSASNGAHPASTQSKSPNHSSSIPTYKWMQLKRNVPKPQAPKLPASGIASMHDYQMNG 424
            |..:.|.|...|.: |..:.:.:|..|:|.||                    |.....||..:..
Zfish    29 GRESKSRTEVGNRS-PVQSSTDTPGTSASTPT--------------------SSSEDGHDKLLGV 72

  Fly   425 QLDMCRGGGGGGSGVGNGPVGVGGNGSPGIGGVLSVQNSLIMANSAAAAGSAHPNGMGVGLGSGS 489
            ..|.||                               ..|:............|.|         
Zfish    73 DPDYCR-------------------------------RILVRDAKGTIREIVLPKG--------- 97

  Fly   490 GLSSCSLSSNTNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRM 554
                  |..:.....||:||.:||..||.||...:|:....|.|:|..|.|:|||||:||||||.
Zfish    98 ------LDLDRPKRTRTSFTAEQLYRLELEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRT 156

  Fly   555 KQKK-----------RVKEGLIPADILTQHSTSVISEKPPQQQQPQPPELQLKSQGSDLGGNELA 608
            ||||           ...|.|...:||.      :.|:......|.||...|.:....  ||...
Zfish   157 KQKKDQTKDTDKRSSSTSESLATCNILR------LLEQGRLLSVPAPPPNPLLAHPHP--GNGSL 213

  Fly   609 TGAPSTPTTAMTLTAPT 625
            .|:||..|::...::.|
Zfish   214 LGSPSVSTSSGVSSSTT 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
labNP_476613.1 Homeodomain 505..558 CDD:459649 29/52 (56%)
vax2NP_919390.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..70 13/61 (21%)
Homeodomain 104..160 CDD:459649 29/55 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 155..175 5/19 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 197..254 10/36 (28%)

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