DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lab and en

DIOPT Version :10

Sequence 1:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_523700.2 Gene:en / 36240 FlyBaseID:FBgn0000577 Length:552 Species:Drosophila melanogaster


Alignment Length:657 Identity:140/657 - (21%)
Similarity:232/657 - (35%) Gaps:212/657 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 APQQHQPHLQLQQQQQHQHLQQPQQHLTYNGYESSSPGNYYPQQQAQLTPPPTSSHQVVQQHQQQ 104
            :||.....:.||.|..| |.||.||                 |||.|:        |.:.|.||.
  Fly     8 SPQSAPSPITLQMQHLH-HQQQQQQ-----------------QQQQQM--------QHLHQLQQL 46

  Fly   105 QQAQQQQL----YPHSHLFSPSAAEYGITTSTTTGNPGTPLHPSSHSPADSYYESDSVHSYYATA 165
            ||..||||    :.|..:...:||......:..          ::|:.|.:..:..|     .:.
  Fly    47 QQLHQQQLAAGVFHHPAMAFDAAAAAAAAAAAA----------AAHAHAAALQQRLS-----GSG 96

  Fly   166 AVATVAPPSNSSPITAANASATS-----------NTQQQQQQAAIISSENGMMYTNLDCMYPTAQ 219
            :.|:.:.|::|:|:|.....:.|           :|..::::|    .|:..:..::|......:
  Fly    97 SPASCSTPASSTPLTIKEEESDSVIGDMSFHNQTHTTNEEEEA----EEDDDIDVDVDDTSAGGR 157

  Fly   220 AQAPVH------------GYAGQIEEKYAAVLHASYAPGMVLEDQDPMMQ--QATQSQM------ 264
            ...|.|            ..:..:.:::..|    ..||..:|:|..:.:  :|::||.      
  Fly   158 LPPPAHQQQSTAKPSLAFSISNILSDRFGDV----QKPGKSMENQASIFRPFEASRSQTATPSAF 218

  Fly   265 -------WHHQQHLAGSYALDAMDSLGMHAHMHHGLPHGHLGNLANNPHQQQPQVQQQQQQPHQQ 322
                   :..||..|.:.|..||           .|...:..|..|                   
  Fly   219 TRVDLLEFSRQQQAAAAAATAAM-----------MLERANFLNCFN------------------- 253

  Fly   323 PQHPQNQSPAAHQQHHQNSVSPNGGMNRQQRGGVISP----------------GSSTSSSTSASN 371
                    |||:.:.|:..|...  :.|.....||.|                ||...:.:....
  Fly   254 --------PAAYPRIHEEIVQSR--LRRSAANAVIPPPMSSKMSDANPEKSALGSLCKAVSQIGQ 308

  Fly   372 GAHPASTQSKSPNHSSSIPTYKWMQLKRNVPKPQAPKLPASGIASMHDYQMNGQLDMCRGGGGGG 436
            .|.|..||....:.:||:.:          |.|.:   .||.|:|......:.. ....|.....
  Fly   309 PAAPTMTQPPLSSSASSLAS----------PPPAS---NASTISSTSSVATSSS-SSSSGCSSAA 359

  Fly   437 SGVGNGP---VGVGGNGSPGIGGVLSVQNSLIMANSAAAAGSAHPNGMGVGLGSGSGLSS----- 493
            |.:.:.|   :|..|:|.    ...|.|...|...||.:..|...:.......:||..:.     
  Fly   360 SSLNSSPSSRLGASGSGV----NASSPQPQPIPPPSAVSRDSGMESSDDTRSETGSTTTEGGKNE 420

  Fly   494 -------CSLSSNTNNSG-------------------RTNFTNKQLTELEKEFHFNRYLTRARRI 532
                   |:..|:..:||                   ||.|:::||..|::||:.|||||..||.
  Fly   421 MWPAWVYCTRYSDRPSSGPRYRRPKQPKDKTNDEKRPRTAFSSEQLARLKREFNENRYLTERRRQ 485

  Fly   533 EIANTLQLNETQVKIWFQNRRMKQKKRV--KEGL---IPADILTQHSTSVISEKPPQQQQPQPPE 592
            ::::.|.|||.|:||||||:|.|.||..  |..|   :.|..|..|:|..:::        :..|
  Fly   486 QLSSELGLNEAQIKIWFQNKRAKIKKSTGSKNPLALQLMAQGLYNHTTVPLTK--------EEEE 542

  Fly   593 LQLKSQG 599
            |:::..|
  Fly   543 LEMRMNG 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
labNP_476613.1 Homeodomain 505..558 CDD:459649 28/52 (54%)
enNP_523700.2 Homeodomain 455..511 CDD:459649 28/55 (51%)
Engrail_1_C_sig 512..542 CDD:431338 6/37 (16%)

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