DRSC/TRiP Functional Genomics Resources

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Protein Alignment lab and Pph13

DIOPT Version :10

Sequence 1:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster


Alignment Length:164 Identity:41/164 - (25%)
Similarity:61/164 - (37%) Gaps:44/164 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   505 RTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKR---------V 560
            ||.|...||.|||:.|....|.....|.|:|..:.|.|.:|::||||||.|.:|:         .
  Fly    14 RTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQEKIGGLGGDY 78

  Fly   561 KEGLIPADILTQHST-------------SVISEKPPQQQQPQPPELQ------------------ 594
            |||.:..|:....|.             :::.:.|||.......||:                  
  Fly    79 KEGALDLDVSYDDSAVLGQLDSALGGGGTLLPDTPPQSSNSLDNELKASYGTGAMSPSRLSPNIF 143

  Fly   595 ----LKSQGSDLGGNELATGAPSTPTTAMTLTAP 624
                :...|.:.||:.|:....:.|......|.|
  Fly   144 LNLNIDHLGLERGGSGLSMEWSTYPPQTQAQTHP 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
labNP_476613.1 Homeodomain 505..558 CDD:459649 23/52 (44%)
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 23/52 (44%)

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