DRSC/TRiP Functional Genomics Resources

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Protein Alignment lab and CG11085

DIOPT Version :10

Sequence 1:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster


Alignment Length:137 Identity:56/137 - (40%)
Similarity:73/137 - (53%) Gaps:12/137 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   431 GGGGGGSGVGNGPVGVGGNGSPGIGGVLSVQNSLIMANSAAAAGSAHPNGMGVGLGSGSGLS--- 492
            |.||||.|.|.|.|..|.:.:....||.:   .|:.|.::.|.|....|| |.|.|||.|.|   
  Fly    86 GSGGGGGGGGGGGVASGLSAAAAAAGVAA---GLLAAAASGANGDRDANG-GSGPGSGGGTSGGY 146

  Fly   493 -----SCSLSSNTNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNR 552
                 ..|.|.......||.||:.||..||::|...:||:.|.|.::|.||.|:|||||.|:|||
  Fly   147 AEHKLQLSKSGRKPRRRRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSETQVKTWYQNR 211

  Fly   553 RMKQKKR 559
            |.|.|::
  Fly   212 RTKWKRQ 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
labNP_476613.1 Homeodomain 505..558 CDD:459649 28/52 (54%)
CG11085NP_572815.3 Homeodomain 161..217 CDD:459649 28/55 (51%)

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