DRSC/TRiP Functional Genomics Resources

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Protein Alignment lab and HOXA10

DIOPT Version :10

Sequence 1:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_061824.3 Gene:HOXA10 / 3206 HGNCID:5100 Length:410 Species:Homo sapiens


Alignment Length:510 Identity:121/510 - (23%)
Similarity:160/510 - (31%) Gaps:203/510 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 TPLHPS----SHSPADSYYESDSVHS--------------------YYATAAVATVAPPSNSSPI 179
            :|.:|:    |.|||.:.:..||:.|                    |||...|  ..||:...| 
Human    11 SPNYPTTMSCSESPAANSFLVDSLISSGRGEAGGGGGGAGGGGGGGYYAHGGV--YLPPAADLP- 72

  Fly   180 TAANASATSNTQQQQQQAAIISSENGMMYTNLDC-MYPTA-----QAQAPVHGYAGQIEEKYAAV 238
                                        |....| ::||.     :|.:|..|..|         
Human    73 ----------------------------YGLQSCGLFPTLGGKRNEAASPGSGGGG--------- 100

  Fly   239 LHASYAPGMVLEDQDPMMQQATQSQMWHHQQHLAGSYALDAMDSLGMHAHMHHGLPHGHLGNLAN 303
              ....||.......|:       .:|           |||..|..|                  
Human   101 --GGLGPGAHGYGPSPI-------DLW-----------LDAPRSCRM------------------ 127

  Fly   304 NPHQQQPQVQQQQQQPHQQPQHPQNQSPAAHQQHHQNSVSPNGGMNRQQRGGVISPGSSTSSSTS 368
            .|....|...|||..|..||..|..|:.:.       |.:.|           |...||.....|
Human   128 EPPDGPPPPPQQQPPPPPQPPQPAPQATSC-------SFAQN-----------IKEESSYCLYDS 174

  Fly   369 ASNGAHPASTQSKSPNHSSSIPTYKWMQLKRNVPKPQAPKLP-------ASGIASMHDYQMNGQL 426
            |          .|.|..|::....        .|.|:.|. |       :||:.....::::...
Human   175 A----------DKCPKVSATAAEL--------APFPRGPP-PDGCALGTSSGVPVPGYFRLSQAY 220

  Fly   427 DMCRG---GGGGGSGVGNGPV-----GVGGNGSPGIGGVLSVQNSLIMANSAAAAGSAHPNGMGV 483
            ...:|   ||||...:|.||.     |.|.:..|.:     ...|...|....|..|..|..:..
Human   221 GTAKGYGSGGGGAQQLGAGPFPAQPPGRGFDLPPAL-----ASGSADAARKERALDSPPPPTLAC 280

  Fly   484 GLGSGS---------------------------------GLSSCSLSSN--TNNSGRTN---FTN 510
            |.|.||                                 |.|....::|  |..|||..   :|.
Human   281 GSGGGSQGDEEAHASSSAAEELSPAPSESSKASPEKDSLGNSKGENAANWLTAKSGRKKRCPYTK 345

  Fly   511 KQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRVKEGLI 565
            .|..||||||.||.||||.||:||:.::.|.:.||||||||||||.||..:|..|
Human   346 HQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKMNRENRI 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
labNP_476613.1 Homeodomain 505..558 CDD:459649 32/55 (58%)
HOXA10NP_061824.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 89..158 23/122 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 221..339 27/122 (22%)
Homeodomain 337..393 CDD:459649 32/55 (58%)

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