DRSC/TRiP Functional Genomics Resources

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Protein Alignment lab and emx3

DIOPT Version :10

Sequence 1:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_571354.1 Gene:emx3 / 30536 ZFINID:ZDB-GENE-990415-53 Length:233 Species:Danio rerio


Alignment Length:94 Identity:36/94 - (38%)
Similarity:51/94 - (54%) Gaps:0/94 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   505 RTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRVKEGLIPADI 569
            ||.|:..||..||:.|..|.|:..|.|.::||.|.|.|||||:||||||.|.|::..|...|...
Zfish   139 RTAFSPSQLLRLERAFEKNHYVVGAERKQLANGLCLTETQVKVWFQNRRTKHKRQKLEEESPDPQ 203

  Fly   570 LTQHSTSVISEKPPQQQQPQPPELQLKSQ 598
            ..:..:..:|......||..|.::.:.|:
Zfish   204 QKRKGSQHVSRWRVATQQGSPEDIDVISE 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
labNP_476613.1 Homeodomain 505..558 CDD:459649 28/52 (54%)
emx3NP_571354.1 Homeodomain 136..192 CDD:459649 28/52 (54%)

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