DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lab and hoxb1b

DIOPT Version :9

Sequence 1:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_571217.2 Gene:hoxb1b / 30374 ZFINID:ZDB-GENE-980526-290 Length:307 Species:Danio rerio


Alignment Length:370 Identity:108/370 - (29%)
Similarity:133/370 - (35%) Gaps:166/370 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   268 QQHLAGSYALDAMDSLGMHAHMHHGLPHGHLGN-LANNPH----------QQQP----------- 310
            |::|..:.|       ..::::..|.|.|  || ..:.||          |.||           
Zfish    28 QEYLPSACA-------STNSYIPEGRPVG--GNTFTSAPHETHGTSYAQIQSQPFHLNVDMGKTG 83

  Fly   311 --QVQQQQQQPHQQPQHPQNQSPAAHQQHHQNSVSP-----NGGMNRQQRGGVISPGSSTSSSTS 368
              ...:|.:.||....|   |........|....||     |.|.|.    |..|..:....|.|
Zfish    84 HSNFCKQTRPPHSDYGH---QHVLTQADDHMRLQSPGFSVVNMGANI----GTYSESNCRPGSVS 141

  Fly   369 AS------------NGAHPASTQSKSPNHSS-------SIPTYKWMQLKRNVPKPQAPKLPASGI 414
            ||            :|....|....||:..|       ..||:.||::|||.||          .
Zfish   142 ASHYQSYAYGEPEPHGYGSFSKYQVSPDSDSDSKTNIKQAPTFDWMKVKRNPPK----------T 196

  Fly   415 ASMHDYQMNGQLDMCRGGGGGGSGVGNGPVGVGGNGSPGIGGVLSVQNSLIMANSAAAAGSAHPN 479
            ..:.:|.::||                                   ||.:               
Zfish   197 VKVAEYGIHGQ-----------------------------------QNII--------------- 211

  Fly   480 GMGVGLGSGSGLSSCSLSSNTNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQ 544
                                     |||||.|||||||||||||:|||||||:|:|.||:|||||
Zfish   212 -------------------------RTNFTTKQLTELEKEFHFNKYLTRARRVEVAATLELNETQ 251

  Fly   545 VKIWFQNRRMKQKKRVKEGLIP-------------ADILTQHSTS 576
            |||||||||||||||.|||..|             ||    ||||
Zfish   252 VKIWFQNRRMKQKKREKEGTAPVIKRVTLCSSGQNAD----HSTS 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
labNP_476613.1 Homeobox 505..557 CDD:278475 45/51 (88%)
hoxb1bNP_571217.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 159..178 4/18 (22%)
Antp-type hexapeptide 183..188 2/4 (50%)
Homeobox 212..264 CDD:306543 45/51 (88%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 265..307 12/32 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 153 1.000 Inparanoid score I4300
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003011
OrthoInspector 1 1.000 - - otm25194
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45946
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
55.150

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