DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lab and hoxb2a

DIOPT Version :9

Sequence 1:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_571191.1 Gene:hoxb2a / 30338 ZFINID:ZDB-GENE-990415-103 Length:390 Species:Danio rerio


Alignment Length:321 Identity:89/321 - (27%)
Similarity:119/321 - (37%) Gaps:126/321 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   336 QHHQNSVSPNGGMNRQQRGGVISPGSSTSSSTSASNGAHPASTQSKSPNHSSSIPT--------- 391
            :|...|:||..|...:.|          |...:||||.. ..||:..|......|.         
Zfish    48 EHTIPSLSPCTGNQARPR----------SQKRTASNGLQ-LRTQTAPPTQHQQGPAPLSGGAPLA 101

  Fly   392 --YKWMQLKRNVPKPQAPKLPASGIASMHDYQMNGQLDMCRGGGGGGSGVGNGPVGVGGNGSPGI 454
              :.||:.|::..|  .||                                           || 
Zfish   102 HEFPWMKEKKSSKK--CPK-------------------------------------------PG- 120

  Fly   455 GGVLSVQNSLIMANSAAAAGSAHPNGMGVGLGSGSGLSSCSLSSNT-------NNSG----RTNF 508
                          :.|||.:|.|:      .:.||.::..|.|.|       |.||    ||.:
Zfish   121 --------------ATAAAAAASPS------QASSGYTTAGLESPTEIQGGLDNVSGSRRLRTAY 165

  Fly   509 TNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRVKEGLIPADILTQH 573
            ||.||.|||||||||:||.|.||:|||..|.|.|.|||:||||||||.|::.          |.|
Zfish   166 TNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQT----------THH 220

  Fly   574 STSVISEKPPQQQQPQPPEL--------QLKSQGSDLGGNELATGAPSTPTTAMTLTAPTS 626
                   :..|:.:|...:|        ...||..::.|:  .:.|||...|..|..|.|:
Zfish   221 -------RDGQEGEPSGFDLLEGTDASSPYSSQSLEVSGS--GSAAPSESETCPTTAAYTN 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
labNP_476613.1 Homeobox 505..557 CDD:278475 37/51 (73%)
hoxb2aNP_571191.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..73 8/34 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 81..100 2/18 (11%)
Antp-type hexapeptide 103..108 1/4 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 108..155 16/112 (14%)
Homeobox 162..214 CDD:278475 37/51 (73%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 211..338 18/81 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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