Protein Alignment lab and Hoxd4

DIOPT Version :9

• Sequence 1: NP_476613.1
• Gene: lab / 40817
• FlyBaseID: FBgn0002522
• Length: 629
• Species: Drosophila melanogaster
• Sequence 2: NP_001099355.1
• Gene: Hoxd4 / 288153
• RGDID: 1309690
• Length: 251
• Species: Rattus norvegicus
• Alignment Length: 256
• Identity: 80/256 - (31%)
• Similarity: 96/256 - (37%)
• Gaps: 82/256 - (32%)

  Fly   407 PKLPASGIASMHDYQMNGQLDMCRGG---GGGGSGVGNGPVGV----------GGNGSPGIGGVL 458
            ||.|     ...:|...|.|.. :|.   |.|..|....|.|:          .|.|.||.|..|
  Rat    15 PKFP-----PCEEYLQGGYLGE-QGADYYGSGAQGSDFQPPGLYPRPDFGEQPFGGGGPGPGSAL 73

  Fly   459 SVQNSLIMANSAAAAGSAHPNGMGVGLGSGS------------GLSSCSL--------------- 496
                       .|......|:|.|....:..            |..:||.
  Rat    74 -----------PARGHGQEPSGPGSHYSAPGEPCPAPPPAPLPGARACSQPTGPKQPPPGTALKQ 127

  Fly   497 --------------SSNTNNSG------RTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLN 541
                          |.|.|.:|      ||.:|.:|:.||||||||||||||.||||||:||.|:
  Rat   128 PAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLS 192

  Fly   542 ETQVKIWFQNRRMKQKKRVKEGLIPADILTQHSTSVISEKPPQQQQPQPPELQLKSQGSDL 602
            |.|:||||||||||.||..|.........:..|:...|..|.|..||     ..|...:||
  Rat   193 ERQIKIWFQNRRMKWKKDHKLPNTKGRSSSSSSSCSSSAAPSQHLQP-----MAKDHHTDL 248

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lab	NP_476613.1	Homeobox	505..557	CDD:278475	39/51 (76%)
Hoxd4	NP_001099355.1	Homeobox	155..209	CDD:395001	39/53 (74%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X14
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.900