DRSC/TRiP Functional Genomics Resources

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Protein Alignment lab and VAX2

DIOPT Version :10

Sequence 1:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_036608.1 Gene:VAX2 / 25806 HGNCID:12661 Length:290 Species:Homo sapiens


Alignment Length:245 Identity:64/245 - (26%)
Similarity:84/245 - (34%) Gaps:68/245 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   424 GQLDMCRGGGGGG-------------SGVGNGPVGVGG----------------NGSPGIGGVLS 459
            |.......|||||             .|.|:.|..|.|                :|.||.|....
Human    11 GPARRAESGGGGGRCGDRSGAGDLRADGGGHSPTEVAGTSASSPAGSRESGADSDGQPGPGEADH 75

  Fly   460 VQNSLIMANSAAAAGSAHPNGMGVGLGSGSGLSSCSLSSNTNNSGRTNFTNKQLTELEKEFHFNR 524
            .:..|:............|.|               |..:.....||:||.:||..||.||...:
Human    76 CRRILVRDAKGTIREIVLPKG---------------LDLDRPKRTRTSFTAEQLYRLEMEFQRCQ 125

  Fly   525 YLTRARRIEIANTLQLNETQVKIWFQNRRMKQKK------------RVKEGLIPADILTQHSTSV 577
            |:....|.|:|..|.|:|||||:||||||.||||            ...|....::||.......
Human   126 YVVGRERTELARQLNLSETQVKVWFQNRRTKQKKDQSRDLEKRASSSASEAFATSNILRLLEQGR 190

  Fly   578 ISEKPPQQQ----QPQPPELQLKSQGSDLGG--------NELATGAPSTP 615
            :...|....    .|..|.|....:|:.||.        |.|::.:.|.|
Human   191 LLSVPRAPSLLALTPSLPGLPASHRGTSLGDPRNSSPRLNPLSSASASPP 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
labNP_476613.1 Homeodomain 505..558 CDD:459649 29/52 (56%)
VAX2NP_036608.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..75 15/63 (24%)
Homeodomain 103..159 CDD:459649 29/55 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 205..240 9/34 (26%)

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