DRSC/TRiP Functional Genomics Resources

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Protein Alignment lab and gbx2

DIOPT Version :9

Sequence 1:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_694496.1 Gene:gbx2 / 245948 ZFINID:ZDB-GENE-020509-2 Length:342 Species:Danio rerio


Alignment Length:337 Identity:86/337 - (25%)
Similarity:122/337 - (36%) Gaps:119/337 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   319 PHQQPQHPQNQSPAAHQQHHQNSVSPNGGMNRQQRGGVISPGSSTSSSTSASNGAHPAST-QSKS 382
            |...|..||:..|..|..|.                   .||..:|..:|.:.|....|| .:..
Zfish    60 PPPPPTLPQSALPTTHPHHP-------------------IPGLPSSFCSSLAQGMALTSTLMATL 105

  Fly   383 PNHSSSIPTYKWMQLKRNV---------PKPQAPKL-----------PASGIASMHD-------- 419
            |...||.|:.:.....|.:         .|.|..:|           .::.|.|.||        
Zfish   106 PGGFSSSPSQQHQDAARKLGSQSIHAMFDKSQDIRLDGEDGKTFATKDSTSIPSFHDSQSVHTST 170

  Fly   420 --------------------YQMNGQLDMCRGGGGGGSGVGNGPVGVGGNGSPGIGGVLSVQNSL 464
                                :.|:..||......|.|:.:....   .|:||.|:..        
Zfish   171 VRGHSKDDSKEDDCHRKDESFSMDSDLDYSSDDNGPGNAMCQKE---DGDGSGGLDD-------- 224

  Fly   465 IMANSAAAAGSAHPNGMGVGLGSGSGLSSCSLSSNTNNSGRTNFTNKQLTELEKEFHFNRYLTRA 529
                             ||..|:|:|.::   |:..|...||.||::||.|||||||..:||:..
Zfish   225 -----------------GVHGGNGAGNTT---STGKNRRRRTAFTSEQLLELEKEFHCKKYLSLT 269

  Fly   530 RRIEIANTLQLNETQVKIWFQNRRMKQKKRVKEG---------------LIPADILTQH-STSVI 578
            .|.:||:.|:|:|.||||||||||.|. ||||.|               ::|..:   | |...|
Zfish   270 ERSQIAHALKLSEVQVKIWFQNRRAKW-KRVKAGNVNSKTGEPSRNPKIVVPIPV---HVSRFAI 330

  Fly   579 SEKPPQQQQPQP 590
            ..:..|.:|.:|
Zfish   331 RSQHQQLEQARP 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
labNP_476613.1 Homeobox 505..557 CDD:278475 32/51 (63%)
gbx2NP_694496.1 Homeobox 244..297 CDD:278475 32/53 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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