DRSC/TRiP Functional Genomics Resources

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Protein Alignment lab and Bsx

DIOPT Version :10

Sequence 1:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_839976.1 Gene:Bsx / 244813 MGIID:2669849 Length:232 Species:Mus musculus


Alignment Length:283 Identity:74/283 - (26%)
Similarity:101/283 - (35%) Gaps:111/283 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   374 HPASTQSKSPNHSSSIPTYKWMQLKRNVPKP---QAPKLPASGIAS---MHDYQMNGQLDMCRGG 432
            ||||:|..:......|..:|        |||   .||...||.:||   :.||            
Mouse    10 HPASSQRPTSFFIEDILLHK--------PKPLREVAPDHFASSLASRVPLLDY------------ 54

  Fly   433 GGGGSGVGNGPVGVGGNGSPGIGGVLSVQNSLIMANSAAAAGSAHPNGMGVGLGSG--------- 488
                             |.|           |:...:.....:.||      |..|         
Mouse    55 -----------------GYP-----------LMPTPTLLTPHAHHP------LHKGDHHHPYFLT 85

  Fly   489 -SGLSSCSLSSNTNNS-----------GRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLN 541
             ||:...:|..:..::           .||.|::.||:.|||.|...|||:...|:|:|..|.|:
Mouse    86 TSGMPVPALFPHPQHAELPGKHCRRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLS 150

  Fly   542 ETQVKIWFQNRRMKQKKRVKEGLIPADILTQHSTSVISEKPPQQQQPQPPELQLKSQGSDLGGNE 606
            |||||.||||||||.||::::.               .::|.....|:.||          |...
Mouse   151 ETQVKTWFQNRRMKHKKQLRKS---------------QDEPKAADGPESPE----------GSPR 190

  Fly   607 LATGAP-----STPTTAMTLTAP 624
            ...|||     |.|..|..||.|
Mouse   191 APEGAPADARLSLPAGAFVLTEP 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
labNP_476613.1 Homeodomain 505..558 CDD:459649 30/52 (58%)
BsxNP_839976.1 Homeodomain 111..167 CDD:459649 30/55 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 160..232 21/79 (27%)

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