DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lab and Hoxb5

DIOPT Version :10

Sequence 1:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_032294.2 Gene:Hoxb5 / 15413 MGIID:96186 Length:269 Species:Mus musculus


Alignment Length:380 Identity:87/380 - (22%)
Similarity:126/380 - (33%) Gaps:160/380 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 SATSNTQQQQQQAAIISSENGMMYTNLDCMYPTAQAQAPVHGYAGQIEEKYAAVLHASYAPGMVL 249
            |.:|.:...:..||:.:...|..|..:|.....:.|.:...|..|:....:.|            
Mouse    26 SGSSLSGSYRDPAAMHTGSYGYNYNGMDLSVNRSSASSSHFGAVGESSRAFPA------------ 78

  Fly   250 EDQDPMMQQATQSQMWHHQQHLAGSYALDAMDSLGMHAHMHHGLPHGHLGNLANNPHQQQPQVQQ 314
            ..|:|..:|||            .|.:|.:.:||    ...:|..||                  
Mouse    79 SAQEPRFRQAT------------SSCSLSSPESL----PCTNGDSHG------------------ 109

  Fly   315 QQQQPHQQPQHPQNQSPAAHQQHHQNSVSPNGGMNRQQRGGVISPGSSTSSST-----SASNGAH 374
                     ..|...||:..                      .:|.||:::.|     |||:...
Mouse   110 ---------AKPSASSPSDQ----------------------ATPASSSANFTEIDEASASSEPE 143

  Fly   375 PASTQSKSPNHSSSIPTYKWMQLKRNVPKPQAPKLPASGIASMH-DYQMNGQLDMCRGGGGGGSG 438
            .|::|..||:.:.:.|  :.|......|:.|.|:: ...:..:| .:.|.|              
Mouse   144 EAASQLSSPSLARAQP--EPMATSTAAPEGQTPQI-FPWMRKLHISHDMTG-------------- 191

  Fly   439 VGNGPVGVGGNGSPGIGGVLSVQNSLIMANSAAAAGSAHPNGMGVGLGSGSGLSSCSLSSNTNNS 503
                                                   |:|                     ..
Mouse   192 ---------------------------------------PDG---------------------KR 196

  Fly   504 GRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKK 558
            .||.:|..|..||||||||||||||.||||||:.|.|:|.|:||||||||||.||
Mouse   197 ARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
labNP_476613.1 Homeodomain 505..558 CDD:459649 38/52 (73%)
Hoxb5NP_032294.2 PRK07003 <67..>171 CDD:235906 32/182 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 75..173 30/176 (17%)
Antp-type hexapeptide 176..181 0/5 (0%)
Homeodomain 195..251 CDD:459649 38/55 (69%)

Return to query results.
Submit another query.