DRSC/TRiP Functional Genomics Resources

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Protein Alignment lab and Hoxa7

DIOPT Version :10

Sequence 1:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001406200.1 Gene:Hoxa7 / 15404 MGIID:96179 Length:270 Species:Mus musculus


Alignment Length:130 Identity:52/130 - (40%)
Similarity:66/130 - (50%) Gaps:28/130 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   468 NSAAAAGSAHPNGMGVGLGSGSGLSSCSLSSNTNNSGRTNFTNKQLTELEKEFHFNRYLTRARRI 532
            |.|.|.|:..|:                     ...||..:|..|..||||||||||||||.|||
Mouse   158 NGAEANGTEGPD---------------------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRI 201

  Fly   533 EIANTLQLNETQVKIWFQNRRMKQKKRVKE-----GLIPADILTQHSTSVISEKPPQQQQPQPPE 592
            |||:.|.|.|.|:||||||||||.||..|:     ...|.|.:.  |.|..::|..::::.:..|
Mouse   202 EIAHALCLTERQIKIWFQNRRMKWKKEHKDESQAPTAAPEDAVP--SVSTAADKADEEEEEEEEE 264

  Fly   593  592
            Mouse   265  264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
labNP_476613.1 Homeodomain 505..558 CDD:459649 37/52 (71%)
Hoxa7NP_001406200.1 Homeodomain 171..227 CDD:459649 38/55 (69%)

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