DRSC/TRiP Functional Genomics Resources

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Protein Alignment lab and Gbx2

DIOPT Version :9

Sequence 1:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_034392.1 Gene:Gbx2 / 14472 MGIID:95668 Length:348 Species:Mus musculus


Alignment Length:325 Identity:88/325 - (27%)
Similarity:127/325 - (39%) Gaps:73/325 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   305 PHQQQPQVQQQQQQPHQQPQHPQNQSPAAHQQHHQNSVSPNGGMNRQQRGGVISPGSSTSSSTSA 369
            |....|.:.|...||...|.||          |||....|.|..:...:|..:     ||:..:.
Mouse    58 PPPPPPALPQAALQPALPPAHP----------HHQIPSLPTGFCSSLAQGMAL-----TSTLMAT 107

  Fly   370 SNGAHPASTQSKSPNHSSSIPTYKWMQLKRNVPKPQAPKLPASG----IASMHDYQMNGQLDMCR 430
            ..|..     |.||.|..:....|:      .|:|    ||..|    ..::.....:|:..:.:
Mouse   108 LPGGF-----SASPQHQEAAAARKF------APQP----LPGGGNFDKAEALQADAEDGKAFLAK 157

  Fly   431 GGG----GGGSGVGNGPVG-VGGNGS---------PGIGGVLSVQNSLIMANSAAAAG-SAH--- 477
            .|.    .....|....|| |.|.|.         .|.....|:::.:..::.....| :||   
Mouse   158 EGSLLAFSAAEAVQASLVGAVRGQGKDESKVEDDPKGKEESFSLESDVDYSSDDNLPGQTAHKEE 222

  Fly   478 -PNGMGVGLGSGSGLSSCSLSSNTNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLN 541
             |...........|.:..:.|:..|...||.||::||.|||||||..:||:...|.:||:.|:|:
Mouse   223 DPGHALEETPQSGGAAGSTTSTGKNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLS 287

  Fly   542 ETQVKIWFQNRRMKQKKRVKEG---------------LIPADILTQH-STSVISEKPPQQQQPQP 590
            |.||||||||||.|. ||||.|               ::|..:   | |...|..:..|.:|.:|
Mouse   288 EVQVKIWFQNRRAKW-KRVKAGNANSKTGEPSRNPKIVVPIPV---HVSRFAIRSQHQQLEQARP 348

  Fly   591  590
            Mouse   349  348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
labNP_476613.1 Homeobox 505..557 CDD:278475 32/51 (63%)
Gbx2NP_034392.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 59..81 7/31 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 111..139 10/42 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 179..251 11/71 (15%)
Homeobox 250..304 CDD:395001 32/54 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.900

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