DRSC/TRiP Functional Genomics Resources

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Protein Alignment lab and Dbx1

DIOPT Version :10

Sequence 1:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001005232.1 Gene:Dbx1 / 13172 MGIID:94867 Length:335 Species:Mus musculus


Alignment Length:306 Identity:79/306 - (25%)
Similarity:117/306 - (38%) Gaps:81/306 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   375 PASTQSKSPNHSSSI----------PTYKWMQLKRNVP----KPQAPKLPASGIASMHDYQMNGQ 425
            |.|.||....|||.:          |||    |.|::|    .|.:.:.|    |::.|   :|.
Mouse    26 PQSLQSAFSGHSSFLVEDLIRISRPPTY----LSRSIPAASLSPPSQEAP----AALAD---SGT 79

  Fly   426 LDMCRGGGGGGSGVGNGP-VGVGGNGSP-----GIGGVLSVQNSLIMANSAAAAGSAHPNGMGVG 484
            .|:  |..|.||..|:.| ..:.....|     |:..:||  ::.....|.|...|..|......
Mouse    80 SDL--GSPGSGSRRGSSPQTALSPASEPTFLKFGVNAILS--SAPRRETSPALLQSPPPKTFAFP 140

  Fly   485 LGSGS--------------------GLSSCSLSSNTN-NSG---RTNFTNKQLTELEKEFHFNRY 525
            ...||                    |..|..|::... ..|   |..|::.|...|||.|...:|
Mouse   141 YFEGSFQPFIRSSYFPASSSVVPIPGTFSWPLAARGKPRRGMLRRAVFSDVQRKALEKTFQKQKY 205

  Fly   526 LTRARRIEIANTLQLNETQVKIWFQNRRMK---QKKR-------VKEGLIPADILTQHSTSVISE 580
            :::..|.::|:.|.|.::||||||||||||   .|:|       .:|..:|..:......|.:.:
Mouse   206 ISKPDRKKLASKLGLKDSQVKIWFQNRRMKWRNSKERELLSSGGCREQTLPTKLNPHPDLSDVGQ 270

  Fly   581 KPPQQQQPQPPELQLKSQGSDLGGNELATGAPSTPTTAMTLTAPTS 626
            |.|..::...|            |..||..||:.|...:....|.|
Mouse   271 KGPGDEEEDNP------------GARLAYHAPADPRHLLEGPLPAS 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
labNP_476613.1 Homeodomain 505..558 CDD:459649 24/55 (44%)
Dbx1NP_001005232.1 PRK12323 <49..182 CDD:481241 31/147 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 58..102 13/52 (25%)
Homeodomain 184..238 CDD:459649 24/53 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 240..335 16/77 (21%)

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