DRSC/TRiP Functional Genomics Resources

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Protein Alignment lab and Dll

DIOPT Version :10

Sequence 1:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_061500243.1 Gene:Dll / 1270045 VectorBaseID:AGAMI1_008705 Length:300 Species:Anopheles gambiae


Alignment Length:266 Identity:75/266 - (28%)
Similarity:101/266 - (37%) Gaps:77/266 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   404 PQAPKLP----------ASGIASMHDYQMNGQLDMCRGGGGGGSGVGN-GPVGVGGNGSPGIGGV 457
            |:||..|          |.|.::..:.|.:|.       ||..||..: ...|...:|.|...|.
Mosquito     4 PEAPHTPKYIDGGATATAPGKSAFVELQQHGY-------GGIRSGYQHFSAQGGQDSGFPSPRGA 61

  Fly   458 LSV------QNSLIMANSAAAAGSAHP-------------NGMGVGLGSGSGLSSCSLSSNTNNS 503
            |..      |||.    |....||..|             .|:.|. |.|..:          ..
Mosquito    62 LGYPFPPMHQNSY----SGYHLGSYAPPCASPPKDDKLEDTGLRVN-GKGKKM----------RK 111

  Fly   504 GRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRVKEGLIPAD 568
            .||.:::.||.:|.:.|...:||....|.|:|.:|.|.:|||||||||||.|.||.:|....|  
Mosquito   112 PRTIYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVKIWFQNRRSKYKKMMKAAQAP-- 174

  Fly   569 ILTQHSTSVISEKP---PQQQQPQPPELQLKSQGSDLGGNELATGAPS-------TPTTAMTLTA 623
                   .|....|   |.|....|.:.|...|..  ||.. ::|:||       :||.:.|   
Mosquito   175 -------GVGGGLPLGGPNQGGHSPSQHQNMHQAP--GGGS-SSGSPSHFLPPGHSPTPSST--- 226

  Fly   624 PTSKQS 629
            |.|:.|
Mosquito   227 PVSELS 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
labNP_476613.1 Homeodomain 505..558 CDD:459649 25/52 (48%)
DllXP_061500243.1 None

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