DRSC/TRiP Functional Genomics Resources

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Protein Alignment lab and Hoxb2

DIOPT Version :9

Sequence 1:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_598793.2 Gene:Hoxb2 / 103889 MGIID:96183 Length:354 Species:Mus musculus


Alignment Length:289 Identity:81/289 - (28%)
Similarity:106/289 - (36%) Gaps:109/289 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   360 GSST----SSSTSASNGAHPASTQSKSPNHSSSIPTYKWMQLKRNVPKP-QAPKLPASGIASMHD 419
            |:||    .|...|.:|  ||.........:...|.:.||:.|::..|| |:...|:...:|:..
Mouse    59 GASTLQRPGSQKQAGDG--PALRSPPPLPVAPPAPEFPWMKEKKSTKKPSQSAASPSPAASSVRA 121

  Fly   420 YQMNGQLDMCRGGGGGGSGVGNGPVGVGGNGSPGIGGVLSVQNSLIMANSAAAAGSAHPNGMGVG 484
            .::                           |||                                
Mouse   122 SEV---------------------------GSP-------------------------------- 127

  Fly   485 LGSGSGLSSCSLSSNTNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWF 549
             ..|.||..|..|.:...  ||.:||.||.|||||||||:||.|.||:|||..|.|.|.|||:||
Mouse   128 -SDGPGLPECGGSGSRRL--RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWF 189

  Fly   550 QNRRMKQKKRVKEGLIPADILTQHSTSVISEKPP---------QQQQPQPPELQLKSQGSDLGGN 605
            ||||||.|::           |||      .:||         |....:|.|....|.| |:..:
Mouse   190 QNRRMKHKRQ-----------TQH------REPPEGEPGGPSAQDDAGEPAEEPTVSPG-DVATH 236

  Fly   606 EL-------------ATGAPSTPTTAMTL 621
            .|             ..|||.:...|.||
Mouse   237 RLREACFHPAEAAQGPRGAPPSALPATTL 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
labNP_476613.1 Homeobox 505..557 CDD:278475 37/51 (73%)
Hoxb2NP_598793.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..143 25/145 (17%)
Antp-type hexapeptide 92..97 1/4 (25%)
Homeobox 145..197 CDD:278475 37/51 (73%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 193..231 13/54 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 246..295 6/20 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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