Protein Alignment lab and Hoxa4

DIOPT Version :9

• Sequence 1: NP_476613.1
• Gene: lab / 40817
• FlyBaseID: FBgn0002522
• Length: 629
• Species: Drosophila melanogaster
• Sequence 2: NP_077326.1
• Gene: Hoxa4 / 100912525
• RGDID: 2814
• Length: 285
• Species: Rattus norvegicus
• Alignment Length: 310
• Identity: 92/310 - (29%)
• Similarity: 119/310 - (38%)
• Gaps: 77/310 - (24%)

  Fly   291 HGLPHGHLGNLANNPHQQQPQVQQQ--QQQPHQQPQHPQNQSPAAHQQHHQNSVSPNGGMNRQQR 353
            ||.|.|..|.:...|...:||....  ...||...|.|...:|.|.:..:...:.|
  Rat    26 HGGPGGGDGGVGGGPGYPRPQSSPHLPAPNPHAARQTPAYYAPRAREPSYHGGLYP--------- 81

  Fly   354 GGVISPGSSTSSSTSASNGAHPA-STQSKSPN-HSSSIPTYKWMQLKRNVPKPQAPKLPASGIAS 416
                   :..::...|..||.|| ..||.:|. |.|              |.||.|..|.
  Rat    82 -------APAAACPYACRGASPARPEQSPAPGAHPS--------------PAPQPPAPPR----- 120

  Fly   417 MHDYQMNGQLDMCRGGGGGGSGVGNGPVGVGGNGSPGIGGVLSVQNSLIMANSAAAAGSAHPNGM 481
                       .|..|       ...|....|..:|..        .|::|:.    |.|.|.|.
  Rat   121 -----------RCAPG-------PTTPAVATGGSAPAC--------PLLLADQ----GPAGPKGK 155

  Fly   482 GVGLGSGSGLSSCSLSSNTNNSG-----RTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLN 541
            ...:.........|..:.:.|.|     ||.:|.:|:.||||||||||||||.||||||:||.|:
  Rat   156 EPVVYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLS 220

  Fly   542 ETQVKIWFQNRRMKQKKRVKEGLIPADILTQHSTSVISEKPPQQQQPQPP 591
            |.||||||||||||.||..|   :|...:...:.:.....||.:.|...|
  Rat   221 ERQVKIWFQNRRMKWKKDHK---LPNTKMRSSNPASAPAGPPGKAQTHSP 267

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lab	NP_476613.1	Homeobox	505..557	CDD:278475	40/51 (78%)
Hoxa4	NP_077326.1	Homeobox	183..236	CDD:278475	40/52 (77%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X14
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	2.000