DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lab and LOC100486032

DIOPT Version :10

Sequence 1:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_002934006.1 Gene:LOC100486032 / 100486032 XenbaseID:XB-GENE-29078139 Length:255 Species:Xenopus tropicalis


Alignment Length:245 Identity:64/245 - (26%)
Similarity:102/245 - (41%) Gaps:70/245 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   372 GAHPASTQSKSPNHSSSIPTYKWMQLKRNVPKPQAPKLPASGIASMHDYQMNGQLDM---CRGGG 433
            |.:|.:.....|:..::.|.|.:...       .||  ||||    |:: :...|.:   .|.| 
 Frog    54 GLYPTAPIYHLPSLGATHPNYPYSSF-------SAP--PASG----HEH-IKASLPLEHWLRAG- 103

  Fly   434 GGGSGVGNGPVGVGGNGSPGIGGVLSVQNSLIMANSAAAAGSAHPNGMGVGLGSGSGLSSCSLSS 498
                                          |::........||.|..||          .|    
 Frog   104 ------------------------------LLLHRGPDLHASAQPGLMG----------KC---- 124

  Fly   499 NTNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQK---KRV 560
               ...||.||::||.|||.:|..|:||:|.:|.|:|.:|.|.||||||||||||||.|   |..
 Frog   125 ---RRPRTAFTSQQLLELENQFKANKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSRKAK 186

  Fly   561 KEGLIPADILTQHSTSVISEKPPQQQQPQPPELQLKSQGSDL--GGNELA 608
            ::|........:.....:|::..::::.:..:.|.:.:|:|:  .|.:|:
 Frog   187 EQGPSEQGDRPRAGGKTLSKEDEEEEEDEEGDFQQEGRGTDMLRHGTQLS 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
labNP_476613.1 Homeodomain 505..558 CDD:459649 34/55 (62%)
LOC100486032XP_002934006.1 Homeodomain 125..181 CDD:459649 33/55 (60%)

Return to query results.
Submit another query.