DRSC/TRiP Functional Genomics Resources

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Protein Alignment lab and hoxb6

DIOPT Version :10

Sequence 1:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_002938066.1 Gene:hoxb6 / 100124320 XenbaseID:XB-GENE-1006005 Length:223 Species:Xenopus tropicalis


Alignment Length:96 Identity:49/96 - (51%)
Similarity:61/96 - (63%) Gaps:7/96 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   491 LSSC--SLSSNTNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRR 553
            ::||  |:...:...||..:|..|..||||||||||||||.||||||::|.|.|.|:||||||||
 Frog   133 MNSCNSSVFGPSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCLTERQIKIWFQNRR 197

  Fly   554 MKQKKRVKEGLIPADILTQHSTSVISEKPPQ 584
            ||.||..|  |:.:.:   .|.....|||.:
 Frog   198 MKWKKESK--LLNSSV---QSAGEDEEKPTE 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
labNP_476613.1 Homeodomain 505..558 CDD:459649 37/52 (71%)
hoxb6XP_002938066.1 Homeodomain 146..202 CDD:459649 38/55 (69%)

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