DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1307 and AT5G16870

DIOPT Version :10

Sequence 1:NP_649675.2 Gene:CG1307 / 40814 FlyBaseID:FBgn0026566 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_568340.1 Gene:AT5G16870 / 831550 AraportID:AT5G16870 Length:169 Species:Arabidopsis thaliana


Alignment Length:178 Identity:73/178 - (41%)
Similarity:104/178 - (58%) Gaps:23/178 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 AVMLSFFVGYRYALKRGDA------KDSVTEGAATPFSQESSVSSGSEASVSDKGYGGLNDNFKM 74
            |:::...:||....:|...      ||..|:.:.:|...|         .::|     :.|:|||
plant     8 ALIVGAALGYCIGTRRSKPVVAAVDKDIKTQSSKSPLEIE---------KLAD-----ILDDFKM 58

  Fly    75 VLVVRNDLKMGKGKIAAQCGHGAVGAYQRAVVRTPRLLRSWENCGCAKIAVRVESEAELMAIKKE 139
            |||||||||||||||||||.|..:|.|::.|.|.|:.|..||.|...|:.|::|.|.|::.:::.
plant    59 VLVVRNDLKMGKGKIAAQCSHATLGLYKKLVRRAPKALDCWEECAQPKVVVKIEDEDEMLELQER 123

  Fly   140 AERQQLNTCLIRDAGRTQIEANSKTVLAV-GPAAAADIDRVTGHLKLL 186
            |:..:|.|.:..|||||||..||:||:|: ||...  :|.|||.||||
plant   124 AKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEV--VDEVTGGLKLL 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1307NP_649675.2 PTH2 72..186 CDD:239108 60/114 (53%)
AT5G16870NP_568340.1 PTH2 56..169 CDD:239108 60/114 (53%)

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