DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1307 and AT3G03010

DIOPT Version :10

Sequence 1:NP_649675.2 Gene:CG1307 / 40814 FlyBaseID:FBgn0026566 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_186951.1 Gene:AT3G03010 / 821157 AraportID:AT3G03010 Length:179 Species:Arabidopsis thaliana


Alignment Length:214 Identity:43/214 - (20%)
Similarity:82/214 - (38%) Gaps:53/214 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TQKLLAIMATVKSFE---QVNDSDGLSSPSSP-----ESPTESPNVISSVQASTIADIIGHYVNG 60
            |||.|. ...:.|::   |..:..|::|.::.     :....:|..:||....:|::       .
plant  1750 TQKALD-FEKISSYQLTVQATNMAGMASNTTTNIQILDENDNAPVFLSSQYVGSISE-------A 1806

  Fly    61 NSIKDVVNSSQKSASQPRTAREPRIKRPMNAFMVWSQQRRQQIAATGQKFHNSDISKMLGAEWRK 125
            ..|..:|.||..|   |...:........||.:|:     |.:.:|.:|:...|.|  .|| .|.
plant  1807 APINSIVRSSDNS---PLVIKASDADSNQNALLVY-----QIVESTAKKYFTVDSS--TGA-IRT 1860

  Fly   126 ME--EHEKVPFVERAKQLREEHFNAHPDYVYRPRRRKRVEKSAGSVDSNSADEITKPVNVYNSST 188
            :.  :||.:.|.         ||:.|             .:.:||....:.:.:...:.|.:.:.
plant  1861 IAYLDHETISFF---------HFHVH-------------VRDSGSPQLTAENPVQVTIEVTDVND 1903

  Fly   189 YTNVFSQLFFK--LLCDTH 205
            ...||::..|:  :|..|:
plant  1904 NPPVFTEAVFETTMLLPTY 1922

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1307NP_649675.2 PTH2 72..186 CDD:239108 22/115 (19%)
AT3G03010NP_186951.1 PTH2 66..178 CDD:239108
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.