DRSC/TRiP Functional Genomics Resources

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Protein Alignment Taf1 and HAF01

DIOPT Version :9

Sequence 1:NP_001246952.1 Gene:Taf1 / 40813 FlyBaseID:FBgn0010355 Length:2172 Species:Drosophila melanogaster
Sequence 2:NP_174552.1 Gene:HAF01 / 840169 AraportID:AT1G32750 Length:1919 Species:Arabidopsis thaliana


Alignment Length:2180 Identity:470/2180 - (21%)
Similarity:741/2180 - (33%) Gaps:825/2180 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EMESDNSDDEGSIGNGLDLTGILFGNIDSEGRLLQDDDGEGRGGTGFDAELRENIGSLS-KLGLD 65
            |..||:.|:......|.:| |.:|||:|:.|.|..|         ..|.:.:|::.:|: |||  
plant    12 ETSSDDDDEYEDNSRGFNL-GFIFGNVDNSGDLDAD---------YLDEDAKEHLSALADKLG-- 64

  Fly    66 SMLLEVIDLKEAEPPSDDEEEEDARPSAVSASEGMSAFDALKAGVKREDGAVKAQDDAIDYSDIT 130
            |.|.::..|.::|..:.|..|:|              :|             :..:||:||.||.
plant    65 SSLPDINLLAKSERTASDPAEQD--------------YD-------------RKAEDAVDYEDID 102

  Fly   131 E---------LSEDCPRTPPEE--------------TSTYDDLEDAIPASKVEAKLREDIAQIFK 172
            |         :||:....|.:|              .|.:|| ||    ...|.:..|:.|.:.|
plant   103 EEYDGPEVQVVSEEDHLLPKKEYFSTAVALGSLKSRASVFDD-ED----YDEEEEQEEEQAPVEK 162

  Fly   173 GLCNSCQSDTITFAPLRLGSDLLLYRENNSHFVAAKDDKELMPPPSAPMRSGSGGGIEEPAKSND 237
            .|      :|....|                 |..|:||.|              ..||.|...|
plant   163 SL------ETEKREP-----------------VVLKEDKAL--------------EYEEEASILD 190

  Fly   238 ASSPSDDSKSTDSKDADRKLDTPLAD----ILPSKYQNVDVRELFPDFRPQKVLRFSRLFGPGKP 298
            ..... |::....::.|..|:..|.|    .||:.|....:          .:|:||.:|...:|
plant   191 KEDHM-DTEDVQEEEVDELLEGTLDDKGATPLPTLYVEDGM----------VILQFSEIFAIHEP 244

  Fly   299 TSLPQIWRHVRKRRRKRNQ---SRDQ-KTTNTGGSDSPSDTEEPRKRGFSLHYAAEPTPAECMSD 359
               ||      ||.|:.|:   .||: |:.:.                           :|.:.|
plant   245 ---PQ------KRDRRENRYVTCRDKYKSMDI---------------------------SELVED 273

  Fly   360 DEDKLLGDFNSEDVRPEGPDNGENSDQKPKVADWRFGPAQIWYDMLEVPDSGEGFNYGFKTKAAS 424
            ||:.||......|...|..|                      ...|:||..   ...|.:...||
plant   274 DEEVLLKSHGRIDTHVEQAD----------------------LIQLDVPFP---IREGLQLVKAS 313

  Fly   425 TSSQPQLKDERRVKSPEDD------VEDPSIADDAFLMVSQL----------HWEDDVVWD---- 469
            |......:.....|...|.      ::...|.|::.|..|||          .||..::|:    
plant   314 TIGGITPESREFTKLGRDSCIMGELLKQDFIDDNSSLCQSQLSMQVFPLDQHEWERRIIWEHSPE 378

  Fly   470 -----------GNDIKAKVLQKLNSKTN-----------------------AAGWLPSSGSRTAG 500
                       |.:.:..:::..||:|.                       :|..|.|.|||   
plant   379 ISGNSGEIFEPGLEPEGMLVKGTNSETEQESLNVVNSRVQVQADNNMFVPFSANLLESFGSR--- 440

  Fly   501 AFSQPGKPSMPVGSGSSKQGSGASSKKAQQNAQAKPAEAPDDTW--------------------- 544
                          ||  |.:..|:.|::.:.|....|:   .|                     
plant   441 --------------GS--QSTNESTNKSRHHPQLLRLES---QWDENHLSGNDEAGVKKIKRLEK 486

  Fly   545 -----YSLFPVENEELIYYKWEDEVIWDAQQVSKVPKPKVLTLDPNDENIILGIPDDIDPSKINK 604
                 :|...:...:|....|.|.:|||:::  ::.:.| |..|..||.::..|.|:        
plant   487 DALGRFSRLVLRERDLGDEAWLDSIIWDSEK--ELSRSK-LIFDLQDEQMVFEIFDN-------- 540

  Fly   605 STGPPPKIKIPHPHVKKSKILLGKAGVINVLAEDTPPPPPKSPDRD-----------PFNISNDT 658
                           ::||.|...||.:.|....      ||.|..           .||:|||.
plant   541 ---------------EESKNLQLHAGAMIVSRSS------KSKDETFQEGCESNSGWQFNLSNDK 584

  Fly   659 YY-TPKTEPTLRLKVGGNLIQ-----HSTPVVELRAPFVPTHMGPMKLRAFHRPPLKKYSHG--- 714
            :| ..|:...|:.....:.:.     ||.|.::|:.  :.:.:....:..||||....|.|.   
plant   585 FYMNGKSSQQLQANTNKSSVHSLRVFHSVPAIKLQT--MKSKLSNKDIANFHRPKALWYPHDNEL 647

  Fly   715 PMAQSIPHPVFPLLKTIAK----------------------------------------KAKQRE 739
            .:.|....|....:|.|.|                                        |.|:.:
plant   648 AIKQQGKLPTRGSMKIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELD 712

  Fly   740 VERIASG-------------------------GGDVFFMRNP------EDLSGRDGDIVLAEFCE 773
            .|:..:.                         .|:...:|.|      .|||.:||.:.|.|:||
plant   713 DEKSLAAQNVQPNSLVHLIRTKVHLWPWAQKLPGENKSLRPPGAFKKKSDLSTKDGHVFLMEYCE 777

  Fly   774 EHPPLINQVGMCSKIKNYYKRKAEKDS-----GPQDFVYGEVAF---AHTSPFLGILHPGQCIQA 830
            |.|.:::..||.:.:..||::.:.:|.     ..|....|.|..   ...|||||.:|.|....:
plant   778 ERPLMLSNAGMGANLCTYYQKSSPEDQRGNLLRNQSDTLGNVMILEPGDKSPFLGEIHAGCSQSS 842

  Fly   831 IENNMYRAPIYPHKMAHNDFLVIRT-RNNYWIRSVNSIYTVGQECPLYEVPGPNSKRANNFTRDF 894
            :|.|||:|||:|.::...|:|::|: :....:|.::.|..|||:.|..||..|.||....:..:.
plant   843 VETNMYKAPIFPQRLQSTDYLLVRSPKGKLSLRRIDKIVVVGQQEPRMEVMSPGSKNLQTYLVNR 907

  Fly   895 LQVFIYRLFWKSRDNPRRIRMDDIKQAFPAHSESSIRKRLKQCADFKRTGMDSNWWVIKPEFRLP 959
            :.|::||.|:|.......|..|::...|...:::.|:|.:|..|.:||.....::|..|.....|
plant   908 MLVYVYREFFKRGGGEHPIAADELSFLFSNLTDAIIKKNMKIIACWKRDKNGQSYWTKKDSLLEP 972

  Fly   960 SEEEIRAMVSPEQCCAYFSMIAAEQRLKDAGYGEKFLFA---------PQEDDDEEAQLKLDDEV 1015
            .|.|::.:|:||..|:|.||:|...|||..|.....|.|         |.|.....|...::.|:
plant   973 PESELKKLVAPEHVCSYESMLAGLYRLKHLGITRFTLPASISNALAQLPDEAIALAAASHIEREL 1037

  Fly  1016 KVAPWNTT----------RAYIQAMRGKCLLQLSGPADPTGCGEGFSYVR-VPNKPT----QTKE 1065
            ::.|||.:          ||.|:.      |:::|..||:|.|.|||||| .|..|.    ..|:
plant  1038 QITPWNLSSNFVACTNQDRANIER------LEITGVGDPSGRGLGFSYVRAAPKAPAAAGHMKKK 1096

  Fly  1066 EQESQPKRSVTGTDADLRRLPLQRAKELLRQFKVPEEEIKKLSRWEVIDVVRTLSTEKAKAGEE- 1129
            ....:...:|||||||||||.::.|:|:|.:|.||:|.|.|.:||..|.::|.||:|:|.:|.: 
plant  1097 AAAGRGAPTVTGTDADLRRLSMEAAREVLIKFNVPDEIIAKQTRWHRIAMIRKLSSEQAASGVKV 1161

  Fly  1130 ---GMDKFSRGNRFSIAEHQERYKEECQRIFDLQNRVLASSEVLSTDEAESSASEESDLEELGKN 1191
               .:.|::||.|.|..:.|::.:|:||.|:|   |.|.|......||.||.....|||:....:
plant  1162 DPTTIGKYARGQRMSFLQMQQQAREKCQEIWD---RQLLSLSAFDGDENESENEANSDLDSFAGD 1223

  Fly  1192 LENML----------SNKKTSTQLS-------RER-------EELERQ-----ELLRQLDEEHGG 1227
            |||:|          ||...:.:|.       |.|       ||:|.:     ||.|.|.::...
plant  1224 LENLLDAEEGGEGEESNISKNDKLDGVKGLKMRRRPSQVETDEEIEDEATEYAELCRLLMQDEDQ 1288

  Fly  1228 PSGSGGAKG---AKGKDDPGQQMLATNNQGRILRITRTFRGNDGKEYTRVETVRRQPVIDAYIKI 1289
            .......||   ..|...|.:..:|..:               |:...:...:.::|       |
plant  1289 KKKKKKMKGVGEGMGSYPPPRPNIALQS---------------GEPVRKANAMDKKP-------I 1331

  Fly  1290 RTTKDEQFIKQFATLDEQQKEEMKREKRRIQEQLRRIKRNQERERLAQLAQNQKLQPGGMPTSLG 1354
            ....|..|:...:|:         ::.|.:...::..|..|.:|....|.|.:|::         
plant  1332 AIQPDASFLVNESTI---------KDNRNVDSIIKTPKGKQVKENSNSLGQLKKVK--------- 1378

  Fly  1355 DPKSSGGHSHKERDSGYKEVSPSRKKFKLKPDLKLKCGACGQVGHMRTNKACPLY--------SG 1411
                    ...|....:||...:|:.|        .||||||.|||||||.||.|        .|
plant  1379 --------ILNENLKVFKEKKSARENF--------VCGACGQHGHMRTNKHCPRYRENTESQPEG 1427

  Fly  1412 MQSSLSQSNPSLAD-----------------------DFDE------------------------ 1429
            :....|...||.::                       ..||                        
plant  1428 IDMDKSAGKPSSSEPSGLPKLKPIKNSKAAPKSAMKTSVDEALKGDKLSSKTGGLPLKFRYGIPA 1492

  Fly  1430 -------------QSEKEMTMDDDDLVNVDG--TKVTLSSKILKRHGGDDGKRRSGS-------- 1471
                         .||:.:..|.|..:....  :|:.:|||...:....:.:|||.|        
plant  1493 GDLSDKPVSEAPGSSEQAVVSDIDTGIKSTSKISKLKISSKAKPKESKGESERRSHSLMPTFSRE 1557

  Fly  1472 -------------------------SSGFTLKVPRDAMG-------------------------- 1485
                                     ||..|:.:||.::.                          
plant  1558 RGESESHKPSVSGQPLSSTERNQAASSRHTISIPRPSLSMDTDQAESRRPHLVIRPPTEREQPQK 1622

  Fly  1486 ----------------------------------------------------------------- 1485
                                                                             
plant  1623 KLVIKRSKEMNDHDMSSLEESPRFESRKTKRMAELAGFQRQQSFRLSENSLERRPKEDRVWWEEE 1687

  Fly  1486 -----------------------------------------------------KKKRRVGGDLHC 1497
                                                                 |||:::..::..
plant  1688 EISTGRHREVRARRDYDDMSVSEEPNEIAEIRRYEEVIRSEREEEERQKAKKKKKKKKLQPEIVE 1752

  Fly  1498 DYLQRHNKTAN------------------------------RRRTDPVVVLSSILEIIHNELRSM 1532
            .||:.:....|                              :||....|.|::|||.|.:.||..
plant  1753 GYLEDYPPRKNDRRLSERGRNVRSRYVSDFERDGAEYAPQPKRRKKGEVGLANILERIVDTLRLK 1817

  Fly  1533 PDVSP-FLFPVSAKKVPDYYRVVTKPMDLQTMREYIRQRRYTSREMFLEDLKQIVDNSLIYN-GP 1595
            .:||. ||.|||.|:.|||..:|..||||.|:|:.:|:..|.:||.|..|:.||..|:.:|| |.
plant  1818 EEVSRLFLKPVSKKEAPDYLDIVENPMDLSTIRDKVRKIEYRNREQFRHDVWQIKYNAHLYNDGR 1882

  Fly  1596 QSAYTLAAQRMFSSCFELLAEREDKLMRLEKAINP 1630
            .......|.::...|..||.:.||:|...||.|:|
plant  1883 NPGIPPLADQLLEICDYLLDDYEDQLKEAEKGIDP 1917

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Taf1NP_001246952.1 TBP-binding 15..76 CDD:286347 19/61 (31%)
DUF3591 652..1114 CDD:288969 157/574 (27%)
zf-CCHC_6 1388..>1418 CDD:291934 17/37 (46%)
Bromo_TFIID 1518..1629 CDD:99943 46/112 (41%)
Bromo_TFIID 1640..1751 CDD:99943
HAF01NP_174552.1 TBP-binding 27..>64 CDD:286347 14/46 (30%)
DUF3591 578..1146 CDD:288969 158/575 (27%)
UBQ 661..733 CDD:294102 6/71 (8%)
UBQ 661..730 CDD:214563 6/68 (9%)
zf-CCHC_6 1399..1432 CDD:291934 17/32 (53%)
Bromodomain 1806..1901 CDD:99922 38/94 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 205 1.000 Domainoid score I833
eggNOG 1 0.900 - - E1_COG5179
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 388 1.000 Inparanoid score I508
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D103411at2759
OrthoFinder 1 1.000 - - FOG0004441
OrthoInspector 1 1.000 - - otm3239
orthoMCL 1 0.900 - - OOG6_102499
Panther 1 1.100 - - LDO PTHR13900
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3145
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.960

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