DRSC/TRiP Functional Genomics Resources

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Protein Alignment Taf1 and cecr2

DIOPT Version :9

Sequence 1:NP_001246952.1 Gene:Taf1 / 40813 FlyBaseID:FBgn0010355 Length:2172 Species:Drosophila melanogaster
Sequence 2:XP_005174419.1 Gene:cecr2 / 799918 ZFINID:ZDB-GENE-131121-533 Length:1502 Species:Danio rerio


Alignment Length:727 Identity:141/727 - (19%)
Similarity:235/727 - (32%) Gaps:221/727 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  1616 EREDK--LMRLEKAINP-LLD-------------------DDDQVALSFIFDKLHSQIKQLPESW 1658
            :||:|  |:...|.:.| ||:                   |||..||..:.:.|    |...::|
Zfish   362 QREEK
AWLLSQGKELPPELLNLETHSPIRRARRTKQFYEIDDDYTALYKVLEAL----KAHKDAW 422

  Fly  1659 PFLKPVNKKQVKDYYTVIKRPMDLETIGKNIEAHRYHSRAEYLADIELIATNCEQYNGSDTRYT- 1722
            ||::||::....:|:.:|:.||||.||.:.:....|.::.|::||::|:..||.:|||.::.|| 
Zfish   423 PFMEPVDESYAPNYHEIIQTPMDLSTIERKLNDGEYLAKDEFVADVKLMFGNCLEYNGEESEYTI 487

  Fly  1723 -------KFSKKILEYAQTQLIEFSE--HCGQLENNIAKTQERARENAPE--------------F 1764
                   .|::.:|::..::..:..|  |....:....|..:..:::.||              .
Zfish   488 MAESLERCFTRALLKHFPSEDGDTDEEFHVSSEDRKDKKKNKNHKQSGPESLIRATEQVQKRKTS 552

  Fly  1765 DEAWGNDDYNFDRGSRASSPGDDYIDVEGHGGHASSSNSIHRSMGAEAGSSHTAPAVRKPAPPG- 1828
            :...||:.......|....|...|.:...|      .::||... .:.|..|.|...::|:.|| 
Zfish   553 NSGKGNNQQQEKPKSTLQPPPPHYSNGPPH------PHNIHPGQ-QQRGMLHPAQQFQRPSGPGM 610

  Fly  1829 -------------PGEVKRGRGRPRKQRDPVEEVKSQNPVKRGRGR------------------- 1861
                         ||:      ||...|.|.:......|....:|.                   
Zfish   611 YAQHMMIDAQYPYPGQ------RPLISRPPGDHENQHVPHFNMQGSHINGPHLGTRYTVGPDGQP 669

  Fly  1862 ---PRKDSLASNMSH-----TQAYFLDEDLQCSTDDEDDDEEEDFQEVSEDENNAASILDQGERI 1918
               |.:....|..:|     .:...|.....||...|.:      ...|.......|:...|...
Zfish   670 LQPPHQQHSYSGPTHGPSLGPRPMALQPGGLCSPPPEGN------MYPSHQHPEGQSMRPMGNAY 728

  Fly  1919 NAPADAMDGMFDP-----KNIKTEIDLEAHQMAEEPIGEDDSQQVAEA-------MVQLSGVGGY 1971
            ..|...|...:.|     .||........||....|.|....:..|..       |:......|:
Zfish   729 TRPGVPMHSSYPPYGPHGMNIPRMWPPMNHQRQPTPSGNMMQEPSASGQHPYNHNMIHSQNSTGF 793

  Fly  1972 ----------YAQQQ-----------QDESMDVDPNYDPSDFLAMHKQRQSLGEPSSLQGAFTNF 2015
                      .|..|           |...:.:....|..:.:|:    |.|...||..  ..||
Zfish   794 TMANGQFKMPSANSQGPVGQKLQGGPQASRLHLASMLDSPEMIAL----QQLSASSSHH--VGNF 852

  Fly  2016 LSHEQDDNGPYNPAEASTSAASGADLGMDASMAMQMAPEMPV----------NTMNNGMGIDDDL 2070
            .|.:|....|...||.|:..       ....|..:.....||          |.|:.|     ::
Zfish   853 QSPQQSGGNPLASAEQSSPE-------KQLHMPSRDKQHTPVSSKGSSPKSGNKMSTG-----EI 905

  Fly  2071 DISE---------SDEEDDGSRV-------RIKKEVFDDGD-YALQ-----HQQMGQAASQSQIY 2113
            .::|         :::.:..|:|       ...||:..:.| :.|.     |.|:........:.
Zfish   906 SLTEAESRSYPSTTEKSEQPSQVTGLASVSSPSKELNQNEDKHRLSNLEKIHDQLNSQLGPPNLK 970

  Fly  2114 MVDSSNEPTTLDYQQP----------------------PQLDFQQVQEMEQLQHQVMPPMQSEQL 2156
            .||..:.|  |:..||                      ||:    :|...|.|.|.:||...:.:
Zfish   971 SVDGFSFP--LNSPQPMPHKTQDDIPLNISQQINKHALPQI----IQNGSQRQSQNVPPQILQNI 1029

  Fly  2157 QQQQTPQGDNDY 2168
            .||.|....:.|
Zfish  1030 PQQMTENVIHQY 1041

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Taf1NP_001246952.1 TBP-binding 15..76 CDD:286347
DUF3591 652..1114 CDD:288969
zf-CCHC_6 1388..>1418 CDD:291934
Bromo_TFIID 1518..1629 CDD:99943 5/14 (36%)
Bromo_TFIID 1640..1751 CDD:99943 32/120 (27%)
cecr2XP_005174419.1 DDT 23..63 CDD:280886
ARGLU 202..366 CDD:291991 2/3 (67%)
Bromo_gcn5_like 403..503 CDD:99941 33/103 (32%)
Med15 675..>1110 CDD:255446 71/397 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D103411at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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