Sequence 1: | NP_001246952.1 | Gene: | Taf1 / 40813 | FlyBaseID: | FBgn0010355 | Length: | 2172 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001178652.1 | Gene: | Taf1 / 317256 | RGDID: | 1562050 | Length: | 1893 | Species: | Rattus norvegicus |
Alignment Length: | 2118 | Identity: | 967/2118 - (45%) |
---|---|---|---|
Similarity: | 1283/2118 - (60%) | Gaps: | 325/2118 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 SDNSDDEGSIGNG-LDLTGILFGNIDSEGRLLQDDDGEGRGGTGFDAELRENIGSLSKLGLDSML 68
Fly 69 LEVIDLKEAEPPSDDEEEEDARPSAVSASEGMSAFDALKAGVKREDGAVKAQDDAIDYSDITELS 133
Fly 134 EDCPRTPPEETSTYDDLEDAIPASKVEAKLREDIAQIFKGLCNSCQSDTITFAPLRLGSDLLLYR 198
Fly 199 ENNSHFVAAKDDKELMPPPSAPMR--------------SGSGGGIEEP---------------AK 234
Fly 235 SNDASSPSDDSKSTDSKDADRKLDTPLADI--------LPSKYQNVDVRELFPDFRPQKVLRFSR 291
Fly 292 LFGPGKPTSLPQIWRHVRKRRRKRNQSRDQKTTNTGGSDSPSDTEEPRKRGFSLHYAAEPTPAEC 356
Fly 357 MSDDEDKLLGDFNSEDVRPEGPDNGENSDQKPKVADWRFGPAQIWYDMLEVPDSGEGFNYGFKTK 421
Fly 422 AASTSSQPQLKDERRVKSPEDDVEDPSIADDAFLMVSQLHWEDDVVWDGNDIKAKVLQKLNSKTN 486
Fly 487 AAGWLPSSGSRTAGAFSQPGKPSMPVGSGSSKQGSGASSKKAQQNAQAKPAEAPDDTWYSLFPVE 551
Fly 552 NEELIYYKWEDEVIWDAQQVSKVPKPKVLTLDPNDENIILGIPDDID------PSKINKSTGPPP 610
Fly 611 KIKIPHPHVKKSKILLGKAGVINVLAEDTPPPPPKSPD-RDPFNISNDTYYTPKTEPTLRLKVGG 674
Fly 675 NLIQHSTPVVELRAPFVPTHMGPMKLRAFHRPPLKKYSHGPMAQSIPHPVFPLLKTIAKKAKQRE 739
Fly 740 VERIASGGGDVFFMRNPEDLSGRDGDIVLAEFCEEHPPLINQVGMCSKIKNYYKRKAEKDSGPQD 804
Fly 805 FVYGEVAFAHTSPFLGILHPGQCIQAIENNMYRAPIYPHKMAHNDFLVIRTRNNYWIRSVNSIYT 869
Fly 870 VGQECPLYEVPGPNSKRANNFTRDFLQVFIYRLFWKSRDNPRRIRMDDIKQAFPAHSESSIRKRL 934
Fly 935 KQCADFKRTGMDSNWWVIKPEFRLPSEEEIRAMVSPEQCCAYFSMIAAEQRLKDAGYGEKFLFAP 999
Fly 1000 QEDDDEEAQLKLDDEVKVAPWNTTRAYIQAMRGKCLLQLSGPADPTGCGEGFSYVRVPNKPTQTK 1064
Fly 1065 EEQESQP-KRSVTGTDADLRRLPLQRAKELLRQFKVPEEEIKKLSRWEVIDVVRTLSTEKAKAGE 1128
Fly 1129 EGMDKFSRGNRFSIAEHQERYKEECQRIFDLQNRVLASSEVLSTDEAESSASEESDLEELGKNLE 1193
Fly 1194 NMLSNKKTSTQLSREREELERQELLRQLDEEHGGPSGSGGAKGAKG-KDDPGQQMLATNNQ--GR 1255
Fly 1256 ILRITRTFRGNDGKEYTRVETVRRQPVIDAYIKIRTTKDEQFIKQFATLDEQQKEEMKREKRRIQ 1320
Fly 1321 EQLRRIKRNQERERLAQLAQNQKLQPGGMPTSLGDPKSSGGHSHKERDSGYKEVSPSRKKFKLKP 1385
Fly 1386 DLKLKCGACGQVGHMRTNKACPLYSGMQSSLSQSNP-SLADDFDEQSEKEMT-MDDDDLVNVDGT 1448
Fly 1449 KVTLSSKILKRHGGDDGKRRSGSSSGFTLKVPRDAM-GKKKRRVGGDLHCDYLQRHNKTANRRRT 1512
Fly 1513 DPVVVLSSILEIIHNELRSMPDVSPFLFPVSAKKVPDYYRVVTKPMDLQTMREYIRQRRYTSREM 1577
Fly 1578 FLEDLKQIVDNSLIYNGPQSAYTLAAQRMFSSCFELLAEREDKLMRLEKAINPLLDDDDQVALSF 1642
Fly 1643 IFDKLHSQ-IKQLPESWPFLKPVNKKQVKDYYTVIKRPMDLETIGKNIEAHRYHSRAEYLADIEL 1706
Fly 1707 IATNCEQYNGSDTRYTKFSKKILEYAQTQLIEFSEHCGQLENNIAKTQERARENAPEFDEAWGND 1771
Fly 1772 DYNFDRGSRASSPGDDYIDVEGHGGHASSSNSIHRSMGAEAGSSHTAPAVRKPAPPGPGEVKRGR 1836
Fly 1837 GRPRKQRDPVEEVKSQNPVKRGRGRPRKDSLASNMSHTQAYFLDEDLQCSTDDEDDDEEEDFQEV 1901
Fly 1902 SEDENNAASILDQGERINAPADAMDGMFDPK-------NIKTEIDLEAHQMAEEPIGEDDSQQVA 1959
Fly 1960 EAMV-----------------QLSGVGGY-YAQQQQDESMDVDPNYDPSDFLAMHKQRQSLGEPS 2006
Fly 2007 SLQGAFTNFLSHEQDDNGPYNPAEASTSAASGADLGMD 2044 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Taf1 | NP_001246952.1 | TBP-binding | 15..76 | CDD:286347 | 21/61 (34%) |
DUF3591 | 652..1114 | CDD:288969 | 333/462 (72%) | ||
zf-CCHC_6 | 1388..>1418 | CDD:291934 | 20/29 (69%) | ||
Bromo_TFIID | 1518..1629 | CDD:99943 | 62/110 (56%) | ||
Bromo_TFIID | 1640..1751 | CDD:99943 | 54/111 (49%) | ||
Taf1 | NP_001178652.1 | TBP-binding | 33..86 | CDD:286347 | 19/53 (36%) |
DUF3591 | 586..1048 | CDD:288969 | 307/468 (66%) | ||
zf-CCHC_6 | 1282..1317 | CDD:291934 | 23/34 (68%) | ||
Bromo_TFIID | 1406..1517 | CDD:99943 | 48/113 (42%) | ||
Bromo_TFIID | 1528..1640 | CDD:99943 | 62/111 (56%) | ||
SEEEED | <1742..1833 | CDD:291463 | 22/90 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 1 | 1.000 | - | - | H37942 | |
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D103411at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |