DRSC/TRiP Functional Genomics Resources

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Protein Alignment Taf1 and Taf1

DIOPT Version :9

Sequence 1:NP_001246952.1 Gene:Taf1 / 40813 FlyBaseID:FBgn0010355 Length:2172 Species:Drosophila melanogaster
Sequence 2:XP_017174001.1 Gene:Taf1 / 270627 MGIID:1336878 Length:1898 Species:Mus musculus


Alignment Length:2133 Identity:972/2133 - (45%)
Similarity:1278/2133 - (59%) Gaps:350/2133 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SDNSDDEGSIGNG-LDLTGILFGNIDSEGRLLQDDDGEGRGGTGFDAELRENIGSLSKLGLDSML 68
            ||...||.|.|.| ..|||.|||||:..|:|        .|.:..|.|.::::..|..|||.|::
Mouse    22 SDTDSDEESAGGGPFSLTGFLFGNINGAGQL--------EGESVLDDECKKHLAGLGALGLGSLI 78

  Fly    69 LEVIDLKEAEPPSDDEEEEDARPSAVSASEGMSAFDALKAGVKREDGAVKAQDDAIDYSDITELS 133
            .|                       ::|:|.:|..|   ..:..::|.:::::||:|||||.|::
Mouse    79 TE-----------------------LTANEELSGSD---GALVNDEGWIRSREDAVDYSDINEVA 117

  Fly   134 EDCPRTPPEETSTYDDLEDAIPASKVEAKLREDIAQIFKGLCNSCQSDTITFAPLRLGSDLLLYR 198
            ||       |:..|.                    |....|...|.:|               |.
Mouse   118 ED-------ESRRYQ--------------------QTMGSLQPLCHTD---------------YD 140

  Fly   199 ENNSHFVAAKDDKELMPPPSAP-------------------MRSGSGGGIEEP---AKSNDASSP 241
            |::........|.:|||||..|                   ..|..|.||..|   |.|:.||..
Mouse   141 EDDYDADCEDIDCKLMPPPPPPPGPLKKEKDQDDITGGYQVQVSEDGEGIILPSIIAPSSLASEK 205

  Fly   242 SDDSKSTDS------KDA------DRKLDTPLADI--------LPSKYQNVDVRELFPDFRPQKV 286
            .|.|.|:||      :||      |.:|..|||.|        |||      |.||||:|||.||
Mouse   206 VDFSSSSDSESEMGPQDAAQSESKDGQLTLPLAGIMQHDATKLLPS------VTELFPEFRPGKV 264

  Fly   287 LRFSRLFGPGKPTSLPQIWRHVRKRRRKRNQSRDQKTTNTGGSDSPSDTEEPRKRGFSLHYAAEP 351
            |||.|||||||  ::|.:||..|::|:|:::...|: ......:...:.|..:|..::..||..|
Mouse   265 LRFLRLFGPGK--NVPSVWRSARRKRKKKHRELIQE-GQVQEEECSVELEVNQKSLWNYDYAPPP 326

  Fly   352 TPAECMSDDEDKLLGDFNSEDVRPEGPDNGENSDQKPKVADWRFGPAQIWYDMLEVPDSGEGFNY 416
            .|.:|:||||..::....|:..:..| |..:..|.||:||:||:|||::|||||.||:.|.||:|
Mouse   327 LPDQCLSDDEITMMAPVESKFSQSTG-DTDKVMDTKPRVAEWRYGPARLWYDMLGVPEDGSGFDY 390

  Fly   417 GFKTKAASTSSQPQLKDERRVKSPEDDVEDPSIADDAFLMVSQLHWEDDVVWDGNDIKAKVLQKL 481
            |||.|.....|..:....::::..|::.....:||:.||||:|||||||::|||.|:|.|..:. 
Mouse   391 GFKMKKTEHESTIKCNIMKKLRKLEENSGVDLLADENFLMVTQLHWEDDIIWDGEDVKHKGTKP- 454

  Fly   482 NSKTNAAGWLPSSGSRTAGAFSQPGKPSMPVGSGSSKQGSGASSKKAQQNAQAKPAEAPDDTWYS 546
             .:.:.|||||||.:|.|.|:             :.:||..|:..             .|..|||
Mouse   455 -QRASLAGWLPSSMTRNAMAY-------------NVQQGFTATLD-------------DDKPWYS 492

  Fly   547 LFPVENEELIYYKWEDEVIWDAQQVSKVPKPKVLTLDPNDENIILGIPDDID------PSKINKS 605
            :||::||:|:|.:|||.:|||||.:.::.:|.||||||||||:||.|||:.:      |||.||.
Mouse   493 IFPIDNEDLVYGRWEDNIIWDAQNMPRILEPPVLTLDPNDENLILEIPDEKEEATSNSPSKENKK 557

  Fly   606 TGPPPKIKIPHPHVKKSKILLGKAGVINVLAEDTPPPPPKSPD-RDPFNISNDTYYTPKTEPTLR 669
                      ...:|||:|||||.|||    ::.|......|: :||:|:|||.||.|| :..||
Mouse   558 ----------ESSLKKSRILLGKTGVI----KEEPQQNMSQPEVKDPWNLSNDEYYYPK-QQGLR 607

  Fly   670 LKVGGNLIQHSTPVVELRAPFVPTHMGPMKLRAFHRPPLKKYSHGPMAQSIPHPVFPLLKTIAKK 734
            ...|||:||||.|.||||.||.||||||:|||.||||||||||.|.::|..||.|.||||.|.||
Mouse   608 GTFGGNIIQHSIPAVELRQPFFPTHMGPIKLRQFHRPPLKKYSFGALSQPGPHSVQPLLKHIKKK 672

  Fly   735 AKQREVERIASGGGDVFFMRNPEDLSGRDGDIVLAEFCEEHPPLINQVGMCSKIKNYYKRKAEKD 799
            ||.||.||.|||||::||||.|:||:|:|||::|||:.||:.||:.||||.:|||||||||..||
Mouse   673 AKMREQERQASGGGEMFFMRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKIKNYYKRKPGKD 737

  Fly   800 SGPQDFVYGEVAFAHTSPFLGILHPGQCIQAIENNMYRAPIYPHKMAHNDFLVIRTRNNYWIRSV 864
            .|..|..|||..:.|||||||.|||||.:||.|||::|||||.|||..:|||:||||..|:||.:
Mouse   738 PGAPDCKYGETVYCHTSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPESDFLIIRTRQGYFIREL 802

  Fly   865 NSIYTVGQECPLYEVPGPNSKRANNFTRDFLQVFIYRLFWKSRDNPRRIRMDDIKQAFPAHSESS 929
            ..|:.|||:|||:|||||||||||...|||||||||||||||:|.||||||:|||:|||:|||||
Mouse   803 VDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRRIRMEDIKKAFPSHSESS 867

  Fly   930 IRKRLKQCADFKRTGMDSNWWVIKPEFRLPSEEEIRAMVSPEQCCAYFSMIAAEQRLKDAGYGEK 994
            ||||||.|||||||||||||||:|.:||||:||||||||||||||||:|||||||||||||||||
Mouse   868 IRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEK 932

  Fly   995 FLFAPQEDDDEEAQLKLDDEVKVAPWNTTRAYIQAMRGKCLLQLSGPADPTGCGEGFSYVRVPNK 1059
            ..|||:|:::|:.|:|:||||:.||||||||:|.||:|||||:::|.|||||||||||||::|||
Mouse   933 SFFAPEEENEEDFQMKIDDEVRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNK 997

  Fly  1060 PTQTKEEQESQP-KRSVTGTDADLRRLPLQRAKELLRQFKVPEEEIKKLSRWEVIDVVRTLSTEK 1123
            |||.|:::|.|| |::|||||||||||.|:.||:|||:|.||||||||||||||||||||:|||:
Mouse   998 PTQQKDDKEPQPVKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQ 1062

  Fly  1124 AKAGEEGMDKFSRGNRFSIAEHQERYKEECQRIFDLQNRVLASSEVLSTDEAESSASEESDLEEL 1188
            |::||..|.||:||:|||:|||||||||||||||||||:||:|:|||||| .:||::|:||.||:
Mouse  1063 ARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEVLSTD-TDSSSAEDSDFEEM 1126

  Fly  1189 GKNLENMLSNKKTSTQLSREREELERQELLRQLDEEHGGPSGSGGAKGAKGKDDPGQQMLATNNQ 1253
            |||:||||.|||||:||||||||.||:||.|.|      .:....|.|...:||....:.:.|:.
Mouse  1127 GKNIENMLQNKKTSSQLSREREEQERKELQRML------LAAGSAAAGNNHRDDDTASVTSLNSS 1185

  Fly  1254 --GRILRITRTFRGNDGKEYTRVETVRRQPVIDAYIKIRTTKDEQFIKQFATLDEQQKEEMKREK 1316
              ||.|:|.||||..:||||.|.||||:..|||||::|||||||:||::||..|||.:|||::|:
Mouse  1186 ATGRCLKIYRTFRDEEGKEYVRCETVRKATVIDAYVRIRTTKDEEFIRKFALFDEQHREEMRKER 1250

  Fly  1317 RRIQEQLRRIKRNQERERLAQLAQNQKLQPGGMPTSLGDPKSSGGHSHKERDSGYKEVSPSRKKF 1381
            |||||||||:|||||:|:|                                 .|..|..|  ||.
Mouse  1251 RRIQEQLRRLKRNQEKEKL---------------------------------KGPPEKKP--KKM 1280

  Fly  1382 KLKPDLKLKCGACGQVGHMRTNKACPLYSGMQSSLSQSNP-SLADDFDEQSEKEMT-MDDDDLVN 1444
            |.:|||||||||||.:|||||||.||||  .|::...||| ::.::.:|:.||.:. .|:::|:.
Mouse  1281 KERPDLKLKCGACGAIGHMRTNKFCPLY--YQTNAPPSNPVAMTEEQEEELEKTVIHNDNEELIK 1343

  Fly  1445 VDGTKVTLSSKILKRHGGDDGKRRSGSSSGFTLKVPRDAM-GKKKRRVGGDLHCDYLQRHNKTAN 1508
            |:|||:.|..::::  ..|:.:|:|     ..||.|:..: .|||||||..:|||||.|.:|:.:
Mouse  1344 VEGTKIVLGKQLIE--SADEVRRKS-----LVLKFPKQQLPPKKKRRVGTTVHCDYLNRPHKSIH 1401

  Fly  1509 RRRTDPVVVLSSILEIIHNELRSMPDVSPFLFPVSAKKVPDYYRVVTKPMDLQTMREYIRQRRYT 1573
            ||||||:|.||||||.|.|::|.:|:..||..||:||.|.|||:::|:||||||:||.:|:|.|.
Mouse  1402 RRRTDPMVTLSSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYP 1466

  Fly  1574 SREMFLEDLKQIVDNSLIYNGPQSAYTLAAQRMFSSCFELLAEREDKLMRLEKAINPLLDDDDQV 1638
            |||.|.|.|:.||.||..||||:.:.|..:|.|...|.|.|.|:||||.||||||||||||||||
Mouse  1467 SREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQV 1531

  Fly  1639 ALSFIFDKLHSQ-IKQLPESWPFLKPVNKKQVKDYYTVIKRPMDLETIGKNIEAHRYHSRAEYLA 1702
            |.|||.|.:.:| :..:|:||||..|||||.|.|||.||..|||||||.|||..|:|.||..:|.
Mouse  1532 AFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVSPMDLETIRKNISKHKYQSRESFLD 1596

  Fly  1703 DIELIATNCEQYNGSDTRYTKFSKKILEYAQTQLIEFSEHCGQLENNIAKTQERARENA------ 1761
            |:.||..|..:|||.:::|||.:::|:......|.|:.||..|||.:|...:|.|.|.|      
Mouse  1597 DVNLILANSVKYNGPESQYTKTAQEIVNVCHQTLTEYDEHLTQLEKDICTAKEAALEEAELESLD 1661

  Fly  1762 -----PEFDEAWGNDDYNFDRGSRASSPGDDYIDVEGHGGHASSSNSIHRSMGAEAGSSHTAPAV 1821
                 |...:|...|.|:.:.....|.....|.|..........|.:..:.:..|.|.       
Mouse  1662 PMTPGPYTPQAKPPDLYDNNTSLSVSRDASVYQDESNLSVLDIPSATSEKQLTQEGGD------- 1719

  Fly  1822 RKPAPPGPGEVKRGRGRPRKQRDPVEEVKSQNPVKRGRGRPRKDSLASNMSHTQAYFLDEDLQCS 1886
                  |.|::.           ..||...|.|                    ||..|.|||..|
Mouse  1720 ------GDGDLA-----------DEEEGTVQQP--------------------QASVLYEDLLMS 1747

  Fly  1887 TDDEDDDEEEDFQEVSEDENNAASILDQGERINAPADAMDGMFDPK-------NIKTEIDLEAHQ 1944
               |.:|:|||.....|.:|...:|  |.....:.:|...|...||       |.:..::.|...
Mouse  1748 ---EGEDDEEDAGSDEEGDNPFFAI--QLSESGSDSDVESGSLRPKQPRVLQENTRMGMENEESM 1807

  Fly  1945 MAEEPIGEDDSQQVAEAMV-----------------QLSGVGGY-YAQQQQDESMDVDPNYDPSD 1991
            |:.|..|.|.|:.:.::.:                 ..|.:||| .:::::||.   :....||.
Mouse  1808 MSYEGDGGDASRGLEDSNISYGSYEEPDPKSNTQDTSFSSIGGYEVSEEEEDEE---EQRSGPSV 1869

  Fly  1992 FLAMHKQRQSLGEPSSLQGAFTNFLSHEQDDNGPYNPAEASTSAASGADLGMD 2044
            ...:|                   ||.:::|:..::      |.|...||..|
Mouse  1870 LSQVH-------------------LSEDEEDSEDFH------SIAGDTDLDSD 1897

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Taf1NP_001246952.1 TBP-binding 15..76 CDD:286347 21/61 (34%)
DUF3591 652..1114 CDD:288969 333/462 (72%)
zf-CCHC_6 1388..>1418 CDD:291934 20/29 (69%)
Bromo_TFIID 1518..1629 CDD:99943 62/110 (56%)
Bromo_TFIID 1640..1751 CDD:99943 54/111 (49%)
Taf1XP_017174001.1 TBP-binding 28..86 CDD:370383 22/58 (38%)
DUF3591 591..1054 CDD:371928 311/469 (66%)
zf-CCHC_6 1287..1322 CDD:373716 23/34 (68%)
Bromo_TFIID 1411..1522 CDD:99943 46/113 (41%)
Bromo_TFIID 1533..1645 CDD:99943 62/111 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167846919
Domainoid 1 1.000 701 1.000 Domainoid score I125
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37942
Inparanoid 1 1.050 1653 1.000 Inparanoid score I79
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46172
OrthoDB 1 1.010 - - D103411at2759
OrthoFinder 1 1.000 - - FOG0004441
OrthoInspector 1 1.000 - - oto91936
orthoMCL 1 0.900 - - OOG6_102499
Panther 1 1.100 - - LDO PTHR13900
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2307
SonicParanoid 1 1.000 - - X3145
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.940

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