DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Taf1 and taf1

DIOPT Version :9

Sequence 1:NP_001246952.1 Gene:Taf1 / 40813 FlyBaseID:FBgn0010355 Length:2172 Species:Drosophila melanogaster
Sequence 2:XP_012824624.1 Gene:taf1 / 100496377 XenbaseID:XB-GENE-952372 Length:1949 Species:Xenopus tropicalis


Alignment Length:2224 Identity:993/2224 - (44%)
Similarity:1324/2224 - (59%) Gaps:381/2224 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 MESDNSDDEGSIGNGLDLTGILFGNIDSEGRLLQDDDGEGRGGTGFDAELRENIGSLSKLGLDSM 67
            |....||:|    ....|||.|||||:.:|:|  :||      :..|.|.::::..|..|||.::
 Frog     1 MSDSESDEE----RPFSLTGFLFGNINEDGQL--EDD------SVLDKESKKHLAGLGALGLGNL 53

  Fly    68 LLEVIDLKEAEPPSDDEEEEDARPSAVSASEGMSAFDALKAGVKREDGAVKAQDDAIDYSDITEL 132
            |.|:..       |.||..|         :||::..|         ||.||:.|||||||||.|:
 Frog    54 LTEITS-------SVDEGAE---------TEGVNVDD---------DGWVKSTDDAIDYSDINEV 93

  Fly   133 SED-------------CPRTPPEETSTYD-DLEDAIPASKVEAKLR-----EDIAQIFKGLCNSC 178
            :||             ..|...::...|| |.||      :::||.     ..:         :|
 Frog    94 AEDESRRYRQAMGNLNLSRRTDDDDDDYDADCED------IDSKLMPPPPPPPV---------TC 143

  Fly   179 QSDTITFAPLRLGSDLLLYRENNSHFVAAKDDKELMPPPSAPMRSGSGGGIEEPAKSNDASS--- 240
            :.|                 |:.....||::|.:.:..||....|.|.....:.:.|:|:.|   
 Frog   144 KKD-----------------EDRPAVSAAQEDNDGIILPSIIASSSSSLERVDFSSSSDSESEIG 191

  Fly   241 PSDDSKSTDSKDADRKLDTPLADI--------LPSKYQNVDVRELFPDFRPQKVLRFSRLFGPGK 297
            |.|  ||.:.|...::|..|||.|        |||      |..|||:|||.|||||.|||||||
 Frog   192 PQD--KSKEEKRERKQLTLPLAGIMQRDATKQLPS------VTALFPEFRPGKVLRFLRLFGPGK 248

  Fly   298 PTSLPQIWRHVRKRRRKRNQSRDQKTTNTGGSDSPSDTEEPRKRGFSLHYAAEPTPAECMSDDED 362
              |:..:||..|::|||:::...|:|....|.::.:..|  :|..:...||..|.|.:|:||||.
 Frog   249 --SVLSVWRSARRKRRKKHREMVQETPAKEGEETEAPVE--KKSCWEYEYAPPPPPEQCLSDDEI 309

  Fly   363 KLLGDFNSEDVRPEGPDNGENSDQKPKVADWRFGPAQIWYDMLEVPDSGEGFNYGFKTKAASTSS 427
            .::.....:..:..| |..:.:|.||:||:||:||||:|||||.||:.|..|:||||.|..:.:.
 Frog   310 TMMAPVEPKFSQSTG-DIDKVADTKPRVAEWRYGPAQLWYDMLGVPEDGSSFDYGFKLKENNDTE 373

  Fly   428 QPQLKDERRVKSPEDDVEDPSIADDAFLMVSQLHWEDDVVWDGNDIKAKVLQKLNSKTNAAGWLP 492
            :.:::.|..|::|:...:   ..|:.||||:||.|||||:|:|.|:|.|..:  ..|.:.|||||
 Frog   374 ENEMQTEEPVEAPDSPTQ---FLDEHFLMVTQLQWEDDVIWNGEDVKHKATK--TQKASLAGWLP 433

  Fly   493 SSGSRTAGAF-SQPG----------------KPSMPVGSGSSKQGSGASSKKAQQNAQAKPAEAP 540
            ||.:|.|.|: :|.|                ||:||   |:.....|......:|.|..:    .
 Frog   434 SSMTRNATAYNAQQGLNRTGSLLNLPTPLVQKPAMP---GALISVKGKEKHPTEQQASIE----E 491

  Fly   541 DDTWYSLFPVENEELIYYKWEDEVIWDAQQVSKVPKPKVLTLDPNDENIILGIPDDIDPSKINKS 605
            |..|:|:||::||||:|.:|||.:|||.|.:.::..|.||.||||||||||.|||:    |...:
 Frog   492 DRPWFSIFPIDNEELVYGRWEDNIIWDDQAMDRILDPPVLNLDPNDENIILEIPDE----KEETT 552

  Fly   606 TGPPPKIKIPHPHVKKSKILLGKAGVINVLAEDTPPPPPKSPD-RDPFNISNDTYYTPKTEPTLR 669
            :..|.|.......:|||:|||||.|||    ::.|......|: :||:|:|||.:|.|| :..||
 Frog   553 SNSPSKESKKESSLKKSRILLGKTGVI----KEEPQQNMSQPEVKDPWNLSNDEFYYPK-QQGLR 612

  Fly   670 LKVGGNLIQHSTPVVELRAPFVPTHMGPMKLRAFHRPPLKKYSHGPMAQSIPHPVFPLLKTIAKK 734
            ...|||:||||.|.||||.||.||||||||||.||||||||||.|.::|..|||...|||.|.||
 Frog   613 GTFGGNIIQHSIPAVELRQPFFPTHMGPMKLRLFHRPPLKKYSFGALSQPGPHPSQSLLKHIKKK 677

  Fly   735 AKQREVERIASGGGDVFFMRNPEDLSGRDGDIVLAEFCEEHPPLINQVGMCSKIKNYYKRKAEKD 799
            ||.||.||.|||||::||||..:||:|:|||::|||:.||:|||:.||||.||||||||||..||
 Frog   678 AKMREQERQASGGGEMFFMRTSQDLTGKDGDLILAEYSEENPPLMMQVGMASKIKNYYKRKPGKD 742

  Fly   800 SGPQDFVYGEVAFAHTSPFLGILHPGQCIQAIENNMYRAPIYPHKMAHNDFLVIRTRNNYWIRSV 864
            .|..|..:||..:.|||||||.|||||.:||.|||::|||||.|||...|||:||||..|:||.:
 Frog   743 PGAPDCKFGETVYCHTSPFLGSLHPGQLLQAFENNLFRAPIYLHKMTETDFLIIRTRQGYYIRDI 807

  Fly   865 NSIYTVGQECPLYEVPGPNSKRANNFTRDFLQVFIYRLFWKSRDNPRRIRMDDIKQAFPAHSESS 929
            ..|:.|||:|||:|||||||||||...|||||||||||||||:|.||||||:|||:|||:|||||
 Frog   808 VDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRRIRMEDIKKAFPSHSESS 872

  Fly   930 IRKRLKQCADFKRTGMDSNWWVIKPEFRLPSEEEIRAMVSPEQCCAYFSMIAAEQRLKDAGYGEK 994
            ||||||.|||||||||||||||:||:||||:||||||||||||||||:|||||||||||||||||
 Frog   873 IRKRLKLCADFKRTGMDSNWWVLKPDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEK 937

  Fly   995 FLFAPQEDDDEEAQLKLDDEVKVAPWNTTRAYIQAMRGKCLLQLSGPADPTGCGEGFSYVRVPNK 1059
            ..|||:|:::|:.|:|:||||:.||||||||:|.||:|||||:::|.|||||||||||||::|||
 Frog   938 SFFAPEEENEEDFQMKIDDEVRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNK 1002

  Fly  1060 PTQTK-EEQESQP-KRSVTGTDADLRRLPLQRAKELLRQFKVPEEEIKKLSRWEVIDVVRTLSTE 1122
            |||.| :::|.|| |::|||||||||||.|:.||:|||:|.||||||||||||||||||||:|||
 Frog  1003 PTQQKQDDKEPQPVKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTE 1067

  Fly  1123 KAKAGEEGMDKFSRGNRFSIAEHQERYKEECQRIFDLQNRVLASSEVLSTDEAESSASEESDLEE 1187
            :|::||..|.||:||:|||:|||||||||||||||||||:||.|:|||||| .:||::|:||.||
 Frog  1068 QARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLESAEVLSTD-TDSSSAEDSDFEE 1131

  Fly  1188 LGKNLENMLSNKKTSTQLSREREELERQELLRQL---------------DEEHGGPSGSGGAKGA 1237
            :|||:||||.|||||:||||||||.||:||.|.|               .:|..|...|..|.|.
 Frog  1132 MGKNIENMLQNKKTSSQLSREREEQERKELQRMLMGEDSGNDKERSRKDKKERKGLGASSAASGG 1196

  Fly  1238 KGKDDPGQQMLATNN--QGRILRITRTFRGNDGKEYTRVETVRRQPVIDAYIKIRTTKDEQFIKQ 1300
            ..|||....:.:.|:  .||.|:|.||||..|||||.|.||||:..|||||.:||||||::||::
 Frog  1197 SHKDDDTASVTSLNSAASGRRLKIYRTFRDEDGKEYVRCETVRKPSVIDAYSRIRTTKDDEFIRK 1261

  Fly  1301 FATLDEQQKEEMKREKRRIQEQLRRIKRNQERERLAQLAQNQKLQPGGMPTSLGDPKSSGGHSHK 1365
            ||..|||.:|||::|:|||||||||:|||||:|:|.                 |.|         
 Frog  1262 FALFDEQHREEMRKERRRIQEQLRRLKRNQEKEKLR-----------------GPP--------- 1300

  Fly  1366 ERDSGYKEVSPSRKKFKLKPDLKLKCGACGQVGHMRTNKACPLYSGMQSSLSQSNP-SLADDFDE 1429
                   |..|  ||.|.:|||||||||||.:|||||||.||||  .|::...||| ::.::.:|
 Frog  1301 -------EKKP--KKMKERPDLKLKCGACGAIGHMRTNKFCPLY--YQTNAPPSNPVAMTEEQEE 1354

  Fly  1430 QSEKEMT-MDDDDLVNVDGTKVTLSSKILKRHGGDDGKRRSGSSSGFTLKVPRDAM-GKKKRRVG 1492
            :.||.:. .|:::|:.|:|||:.|..::::  ..|:.:|:|     ..||.|:..: .|||||||
 Frog  1355 ELEKTVIHNDNEELIKVEGTKIVLGKQLIE--SADEVRRKS-----LVLKFPKQQLPQKKKRRVG 1412

  Fly  1493 GDLHCDYLQRHNKTANRRRTDPVVVLSSILEIIHNELRSMPDVSPFLFPVSAKKVPDYYRVVTKP 1557
            ..:|||||.|.:|:.:||||||:|.|||:||.|.|::|.||:..||..||:||.|.|||::|..|
 Frog  1413 STVHCDYLNRPHKSIHRRRTDPMVTLSSVLESIINDMRDMPNTYPFHSPVNAKVVKDYYKIVINP 1477

  Fly  1558 MDLQTMREYIRQRRYTSREMFLEDLKQIVDNSLIYNGPQSAYTLAAQRMFSSCFELLAEREDKLM 1622
            |||||:||.:|:|.|.|||.|.|.::.||.||::||||:.:.|...|.|...|.|.|.|:||||.
 Frog  1478 MDLQTLRENVRKRMYPSREEFREAVELIVKNSILYNGPKHSLTQICQAMLELCEEKLREKEDKLA 1542

  Fly  1623 RLEKAINPLLDDDDQVALSFIFDKLHSQ-IKQLPESWPFLKPVNKKQVKDYYTVIKRPMDLETIG 1686
            |||||||||||||||||.|||.|.:.:| :..:|:||||..|||||.|.|||.||..|||||||.
 Frog  1543 RLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETIR 1607

  Fly  1687 KNIEAHRYHSRAEYLADIELIATNCEQYNGSDTRYTKFSKKILEYAQTQLIEFSEHCGQLENNIA 1751
            :||..|:|.:|..:.||:.||..|..:|||.|::|:|.:::|:......|:|:.||..|||.:|:
 Frog  1608 QNISKHKYQNREFFQADVNLIYANSIKYNGQDSQYSKTAQEIVNICIQTLLEYDEHLTQLEKDIS 1672

  Fly  1752 KTQERARENAPEFDEAWGNDDYNFDRGSRASSPG------DDYIDVEGHGGHASSSNSIHRSMGA 1810
            ..:|.|.|.|         |..:.|    ..:||      .||.|          :|:.| ||..
 Frog  1673 TAKEAALEEA---------DLESLD----PMTPGPYTPQPPDYYD----------TNTSH-SMSR 1713

  Fly  1811 EAG-----SSHTAPAVRKPAPPGPGEVKRGRGRPRKQRDPVEEVKSQNPVKRGRGRPRKDSLASN 1870
            ||.     |:.:|..:                       ....::.::.::.||.|..:|.    
 Frog  1714 EASFYQDESNLSATEI-----------------------ATASLEKRSLMRLGRSRMGEDD---- 1751

  Fly  1871 MSHTQAYFLDEDLQCSTDDEDDDEEE----DFQEVSEDENNA----ASILDQGERINAPADAMDG 1927
                    .|.|:: ..:||||.:.:    :.::..||||:.    ||:|.|             
 Frog  1752 --------SDVDIE-GYEDEDDGKPKTPAPEVEDAEEDENSVQQPQASVLYQ------------- 1794

  Fly  1928 MFDPKNIKTEIDLEAHQMAEEPIGEDDSQQVAE-------AMVQLSGVGGYYAQQQQDESMDVDP 1985
                       ||   .|:|   ||||....::       :.:|||..|    .....||..:.|
 Frog  1795 -----------DL---LMSE---GEDDEDDGSDEEGDNPFSSIQLSESG----SDSDIESAGIRP 1838

  Fly  1986 NYDPSDFLAMHKQRQSLGEPSSLQGAFTNFLSHEQDDNGPYNPAEASTSAASGADLG---MDASM 2047
            .                 :|..:|         |....|..| .|:..|...|||..   .|:::
 Frog  1839 K-----------------QPHMMQ---------ENTRMGMEN-EESMMSYGEGADASHVLEDSNI 1876

  Fly  2048 AMQM--APEMPVNTMNNGMGIDDDLDISESDEEDD----GSRVRIKKEVFDDGDYALQHQQMGQA 2106
            :.:.  .|:...||.:.........::||.:|::|    |..|..:.::.:|.:.:.:.:.:|..
 Frog  1877 SYESYEEPDPKSNTRDTSFSSMGGYELSEEEEDEDEEHHGPSVLSQVQLSEDEEDSEEFRSIGGD 1941

  Fly  2107 ASQSQIYMVDSSNE 2120
            :.      :||.||
 Frog  1942 SD------IDSDNE 1949

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Taf1NP_001246952.1 TBP-binding 15..76 CDD:286347 20/60 (33%)
DUF3591 652..1114 CDD:288969 333/463 (72%)
zf-CCHC_6 1388..>1418 CDD:291934 20/29 (69%)
Bromo_TFIID 1518..1629 CDD:99943 61/110 (55%)
Bromo_TFIID 1640..1751 CDD:99943 52/111 (47%)
taf1XP_012824624.1 TBP-binding 9..>41 CDD:286347 15/43 (35%)
DUF3591 596..1059 CDD:288969 333/463 (72%)
zf-CCHC_6 1314..1349 CDD:291934 23/36 (64%)
Bromo_TFIID 1438..1549 CDD:99943 61/110 (55%)
Bromo_TFIID 1560..1671 CDD:99943 52/110 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 702 1.000 Domainoid score I125
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H37942
Inparanoid 1 1.050 1629 1.000 Inparanoid score I76
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D103411at2759
OrthoFinder 1 1.000 - - FOG0004441
OrthoInspector 1 1.000 - - oto102249
Panther 1 1.100 - - LDO PTHR13900
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3145
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.160

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