Sequence 1: | NP_001246952.1 | Gene: | Taf1 / 40813 | FlyBaseID: | FBgn0010355 | Length: | 2172 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012824624.1 | Gene: | taf1 / 100496377 | XenbaseID: | XB-GENE-952372 | Length: | 1949 | Species: | Xenopus tropicalis |
Alignment Length: | 2224 | Identity: | 993/2224 - (44%) |
---|---|---|---|
Similarity: | 1324/2224 - (59%) | Gaps: | 381/2224 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 MESDNSDDEGSIGNGLDLTGILFGNIDSEGRLLQDDDGEGRGGTGFDAELRENIGSLSKLGLDSM 67
Fly 68 LLEVIDLKEAEPPSDDEEEEDARPSAVSASEGMSAFDALKAGVKREDGAVKAQDDAIDYSDITEL 132
Fly 133 SED-------------CPRTPPEETSTYD-DLEDAIPASKVEAKLR-----EDIAQIFKGLCNSC 178
Fly 179 QSDTITFAPLRLGSDLLLYRENNSHFVAAKDDKELMPPPSAPMRSGSGGGIEEPAKSNDASS--- 240
Fly 241 PSDDSKSTDSKDADRKLDTPLADI--------LPSKYQNVDVRELFPDFRPQKVLRFSRLFGPGK 297
Fly 298 PTSLPQIWRHVRKRRRKRNQSRDQKTTNTGGSDSPSDTEEPRKRGFSLHYAAEPTPAECMSDDED 362
Fly 363 KLLGDFNSEDVRPEGPDNGENSDQKPKVADWRFGPAQIWYDMLEVPDSGEGFNYGFKTKAASTSS 427
Fly 428 QPQLKDERRVKSPEDDVEDPSIADDAFLMVSQLHWEDDVVWDGNDIKAKVLQKLNSKTNAAGWLP 492
Fly 493 SSGSRTAGAF-SQPG----------------KPSMPVGSGSSKQGSGASSKKAQQNAQAKPAEAP 540
Fly 541 DDTWYSLFPVENEELIYYKWEDEVIWDAQQVSKVPKPKVLTLDPNDENIILGIPDDIDPSKINKS 605
Fly 606 TGPPPKIKIPHPHVKKSKILLGKAGVINVLAEDTPPPPPKSPD-RDPFNISNDTYYTPKTEPTLR 669
Fly 670 LKVGGNLIQHSTPVVELRAPFVPTHMGPMKLRAFHRPPLKKYSHGPMAQSIPHPVFPLLKTIAKK 734
Fly 735 AKQREVERIASGGGDVFFMRNPEDLSGRDGDIVLAEFCEEHPPLINQVGMCSKIKNYYKRKAEKD 799
Fly 800 SGPQDFVYGEVAFAHTSPFLGILHPGQCIQAIENNMYRAPIYPHKMAHNDFLVIRTRNNYWIRSV 864
Fly 865 NSIYTVGQECPLYEVPGPNSKRANNFTRDFLQVFIYRLFWKSRDNPRRIRMDDIKQAFPAHSESS 929
Fly 930 IRKRLKQCADFKRTGMDSNWWVIKPEFRLPSEEEIRAMVSPEQCCAYFSMIAAEQRLKDAGYGEK 994
Fly 995 FLFAPQEDDDEEAQLKLDDEVKVAPWNTTRAYIQAMRGKCLLQLSGPADPTGCGEGFSYVRVPNK 1059
Fly 1060 PTQTK-EEQESQP-KRSVTGTDADLRRLPLQRAKELLRQFKVPEEEIKKLSRWEVIDVVRTLSTE 1122
Fly 1123 KAKAGEEGMDKFSRGNRFSIAEHQERYKEECQRIFDLQNRVLASSEVLSTDEAESSASEESDLEE 1187
Fly 1188 LGKNLENMLSNKKTSTQLSREREELERQELLRQL---------------DEEHGGPSGSGGAKGA 1237
Fly 1238 KGKDDPGQQMLATNN--QGRILRITRTFRGNDGKEYTRVETVRRQPVIDAYIKIRTTKDEQFIKQ 1300
Fly 1301 FATLDEQQKEEMKREKRRIQEQLRRIKRNQERERLAQLAQNQKLQPGGMPTSLGDPKSSGGHSHK 1365
Fly 1366 ERDSGYKEVSPSRKKFKLKPDLKLKCGACGQVGHMRTNKACPLYSGMQSSLSQSNP-SLADDFDE 1429
Fly 1430 QSEKEMT-MDDDDLVNVDGTKVTLSSKILKRHGGDDGKRRSGSSSGFTLKVPRDAM-GKKKRRVG 1492
Fly 1493 GDLHCDYLQRHNKTANRRRTDPVVVLSSILEIIHNELRSMPDVSPFLFPVSAKKVPDYYRVVTKP 1557
Fly 1558 MDLQTMREYIRQRRYTSREMFLEDLKQIVDNSLIYNGPQSAYTLAAQRMFSSCFELLAEREDKLM 1622
Fly 1623 RLEKAINPLLDDDDQVALSFIFDKLHSQ-IKQLPESWPFLKPVNKKQVKDYYTVIKRPMDLETIG 1686
Fly 1687 KNIEAHRYHSRAEYLADIELIATNCEQYNGSDTRYTKFSKKILEYAQTQLIEFSEHCGQLENNIA 1751
Fly 1752 KTQERARENAPEFDEAWGNDDYNFDRGSRASSPG------DDYIDVEGHGGHASSSNSIHRSMGA 1810
Fly 1811 EAG-----SSHTAPAVRKPAPPGPGEVKRGRGRPRKQRDPVEEVKSQNPVKRGRGRPRKDSLASN 1870
Fly 1871 MSHTQAYFLDEDLQCSTDDEDDDEEE----DFQEVSEDENNA----ASILDQGERINAPADAMDG 1927
Fly 1928 MFDPKNIKTEIDLEAHQMAEEPIGEDDSQQVAE-------AMVQLSGVGGYYAQQQQDESMDVDP 1985
Fly 1986 NYDPSDFLAMHKQRQSLGEPSSLQGAFTNFLSHEQDDNGPYNPAEASTSAASGADLG---MDASM 2047
Fly 2048 AMQM--APEMPVNTMNNGMGIDDDLDISESDEEDD----GSRVRIKKEVFDDGDYALQHQQMGQA 2106
Fly 2107 ASQSQIYMVDSSNE 2120 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Taf1 | NP_001246952.1 | TBP-binding | 15..76 | CDD:286347 | 20/60 (33%) |
DUF3591 | 652..1114 | CDD:288969 | 333/463 (72%) | ||
zf-CCHC_6 | 1388..>1418 | CDD:291934 | 20/29 (69%) | ||
Bromo_TFIID | 1518..1629 | CDD:99943 | 61/110 (55%) | ||
Bromo_TFIID | 1640..1751 | CDD:99943 | 52/111 (47%) | ||
taf1 | XP_012824624.1 | TBP-binding | 9..>41 | CDD:286347 | 15/43 (35%) |
DUF3591 | 596..1059 | CDD:288969 | 333/463 (72%) | ||
zf-CCHC_6 | 1314..1349 | CDD:291934 | 23/36 (64%) | ||
Bromo_TFIID | 1438..1549 | CDD:99943 | 61/110 (55%) | ||
Bromo_TFIID | 1560..1671 | CDD:99943 | 52/110 (47%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 702 | 1.000 | Domainoid score | I125 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 1 | 1.000 | - | - | H37942 | |
Inparanoid | 1 | 1.050 | 1629 | 1.000 | Inparanoid score | I76 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D103411at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0004441 | |
OrthoInspector | 1 | 1.000 | - | - | oto102249 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR13900 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X3145 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 8.160 |