DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sowi and Cib4

DIOPT Version :9

Sequence 1:NP_649671.2 Gene:sowi / 40809 FlyBaseID:FBgn0037460 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_082759.1 Gene:Cib4 / 73259 MGIID:1920509 Length:185 Species:Mus musculus


Alignment Length:183 Identity:32/183 - (17%)
Similarity:74/183 - (40%) Gaps:43/183 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 IKELTLTSELSQTDITCLLVVYYKFSKANGPQCKQMTKKQFYQIFLVLFNVASVQVIERTLLAIT 88
            ::|....:.|::.:|.|:...:.|...:.         |.:.:..|.:..|:|:..:.       
Mouse    14 LEEYQALTFLTRNEILCIHDTFLKLCPSG---------KHYKEATLTMDQVSSLPALR------- 62

  Fly    89 KDTKYVSP------RAWIHLFDLYTTNDI-------------QVRMRFAFEVYDTKGTGVIDREQ 134
                 |:|      |.:.| .::::..|:             .:::.:||.:||....|.||.|.
Mouse    63 -----VNPFRDRICRVFSH-DNVFSFEDVLGMASVFSEQACPSLKIEYAFRIYDFNENGFIDEED 121

  Fly   135 VGTACEKFFYGEDEDELNELKADMTEFLMKKFDLDKDGVISYEDYSTVVEQQP 187
            :.....:....:|..|  :|..|:...::.:.|||.|.::|:.::...:.:.|
Mouse   122 LEEIVLRLLKSDDASE--DLLMDVMHHVLSESDLDNDSMLSFSEFEHAMAKSP 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sowiNP_649671.2 EF-hand_7 115..179 CDD:290234 17/63 (27%)
EFh 116..178 CDD:238008 17/61 (28%)
Cib4NP_082759.1 FRQ1 21..173 CDD:227455 31/176 (18%)
EFh 101..169 CDD:238008 17/69 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0034
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.