DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sowi and CHP2

DIOPT Version :9

Sequence 1:NP_649671.2 Gene:sowi / 40809 FlyBaseID:FBgn0037460 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_071380.1 Gene:CHP2 / 63928 HGNCID:24927 Length:196 Species:Homo sapiens


Alignment Length:201 Identity:40/201 - (19%)
Similarity:76/201 - (37%) Gaps:61/201 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 GSLIKELTLTSELSQTDITCLLVVYYKFSKANGPQCKQMTKKQFYQIFLVLFNVASVQVIE---- 81
            |..|:..|..|:.|      ||.::::|...:..:...:::....||..:..|....::||    
Human    14 GDSIRRETGFSQAS------LLRLHHRFRALDRNKKGYLSRMDLQQIGALAVNPLGDRIIESFFP 72

  Fly    82 ------------RTLLAI---------TKDTKYVSPRAWIHLFDLYTTNDIQVRMRFAFEVYDTK 125
                        |.|...         |:|.|...|           .|..:.::.:||::||..
Human    73 DGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEP-----------LNSRRNKLHYAFQLYDLD 126

  Fly   126 GTGVIDREQ--------VGTACEKFFYGEDEDELNELKADMTEFLMKKFDLDKDGVISYEDYSTV 182
            ..|.|.|.:        ||...       .|::|..: ||.|   :::.|.|.||.:|:.:::..
Human   127 RDGKISRHEMLQVLRLMVGVQV-------TEEQLENI-ADRT---VQEADEDGDGAVSFVEFTKS 180

  Fly   183 VEQQPI 188
            :|:..:
Human   181 LEKMDV 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sowiNP_649671.2 EF-hand_7 115..179 CDD:290234 19/71 (27%)
EFh 116..178 CDD:238008 19/69 (28%)
CHP2NP_071380.1 FRQ1 16..179 CDD:227455 38/190 (20%)
Nuclear export signal 137..148 2/10 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0034
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.