DRSC/TRiP Functional Genomics Resources

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Protein Alignment sowi and vsnl1b

DIOPT Version :10

Sequence 1:NP_649671.2 Gene:sowi / 40809 FlyBaseID:FBgn0037460 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_001314871.1 Gene:vsnl1b / 561162 ZFINID:ZDB-GENE-080225-39 Length:191 Species:Danio rerio


Alignment Length:196 Identity:38/196 - (19%)
Similarity:81/196 - (41%) Gaps:28/196 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 ENSRFAALYGSLIKELTLTSELSQTDITCLLVVYYKFSKANGPQCKQMTKKQFYQIFLVLFNVAS 76
            :||:   |...::::|...:|.::.:    |..:||....:.|. .::..::|.|:::..|....
Zfish     4 QNSK---LTPEVMEDLVKNTEFNEHE----LKQWYKGFLKDCPS-GRLNLEEFQQLYVKFFPYGD 60

  Fly    77 V-QVIERTLLAITKDTK-YVSPRAWIHLFDLYTTNDIQVRMRFAFEVYDTKGTGVIDR------- 132
            . :..:.......|::. .:..|.:|....:.:....:.::.:||.:||..|.|.|.|       
Zfish    61 ASKFAQHAFRTFDKNSDGTIDFREFICALSITSRGSFEQKLNWAFNMYDLDGDGKITRVEMLEII 125

  Fly   133 ----EQVGTACEKFFYGEDEDELN-ELKADMTEFLMKKFDLDKDGVISYEDYSTVVEQQPILVEF 192
                :.|||.   .....:||.|. |.:.|.   :..|.|.:.|..|:.:::....:..|.:|..
Zfish   126 EAIYKMVGTV---IMMKMNEDGLTPEQRVDR---IFSKMDKNNDDQITLDEFKEAAKSDPSIVLL 184

  Fly   193 L 193
            |
Zfish   185 L 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sowiNP_649671.2 EF-hand_7 114..179 CDD:463900 20/76 (26%)
vsnl1bNP_001314871.1 FRQ1 21..177 CDD:444056 31/166 (19%)

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