DRSC/TRiP Functional Genomics Resources

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Protein Alignment sowi and clxn

DIOPT Version :10

Sequence 1:NP_649671.2 Gene:sowi / 40809 FlyBaseID:FBgn0037460 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_001016778.1 Gene:clxn / 549532 XenbaseID:XB-GENE-5727529 Length:208 Species:Xenopus tropicalis


Alignment Length:210 Identity:49/210 - (23%)
Similarity:94/210 - (44%) Gaps:21/210 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ENLDATIDSMENSRFAALYGSLIKELTLTSELSQTDITCLLVVYYKF-SKANGPQCKQ-MTKKQF 64
            :||....|::..         |||      ..|:.::..|:.:|:.. .:...|..:: :.:..|
 Frog     4 KNLQKQADALSR---------LIK------HFSKNEVESLIRLYHTLVGRPIDPNTRRGIDRNTF 53

  Fly    65 YQIFLVLFNVASVQVIERTLLAITKDT-KYVSPRAWIHLFDLYTTNDIQVRMRFAFEVYDTKGTG 128
            ..|....|.:....:::|......||. .|:|...|:....::....::.|:::.|.|||..|.|
 Frog    54 RNILHNTFGMTDDMIMDRVFRGFDKDNDSYISVTEWVEGLSVFLRGTLEERIKYCFGVYDLNGDG 118

  Fly   129 VIDREQVGTACEKFFYGE-DEDELNELKADMTEFLMKKFDLDKDGVISYEDYSTVVEQQPILVEF 192
            .|.||::....:.....: .|::.:|...|:.|..:||.|.|.|..:||.|:...|:::.:|:|.
 Frog   119 YISREEMFHMLKNSLLKQPSEEDPDEGVKDLVEIALKKMDYDHDSKLSYMDFEKAVQEENLLLEA 183

  Fly   193 LGWLFPSKEDKDLMA 207
            .|...|  :.|.:||
 Frog   184 FGPCLP--DSKCIMA 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sowiNP_649671.2 EF-hand_7 114..179 CDD:463900 21/65 (32%)
clxnNP_001016778.1 FRQ1 <66..176 CDD:444056 29/109 (27%)

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