DRSC/TRiP Functional Genomics Resources

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Protein Alignment sowi and vsnl1a

DIOPT Version :10

Sequence 1:NP_649671.2 Gene:sowi / 40809 FlyBaseID:FBgn0037460 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_001007367.1 Gene:vsnl1a / 492494 ZFINID:ZDB-GENE-041001-211 Length:191 Species:Danio rerio


Alignment Length:199 Identity:42/199 - (21%)
Similarity:80/199 - (40%) Gaps:34/199 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 ENSRFAALYGSLIKELTLTSELSQTDITCLLVVYYK-FSKANGPQCK--QMTKKQFYQIFLVLFN 73
            :||:   |...::::|...:|.::.:    |..:|| |.|    .|.  ::...:|.|:::..|.
Zfish     4 QNSK---LTPEVMEDLVKNTEFNEHE----LKQWYKGFLK----DCPTGRLNLDEFQQLYVKFFP 57

  Fly    74 VASV-QVIERTLLAITKD-TKYVSPRAWIHLFDLYTTNDIQVRMRFAFEVYDTKGTGVIDR---- 132
            .... :..:.......|: ...:..|.:|....:.:....:.::.:||.:||..|.|.|.|    
Zfish    58 YGDASKFAQHAFRTFDKNGDGTIDFREFICALSITSRGSFEQKLNWAFNMYDLDGDGKITRVEML 122

  Fly   133 -------EQVGTACEKFFYGEDEDELN-ELKADMTEFLMKKFDLDKDGVISYEDYSTVVEQQPIL 189
                   :.|||.   .....:||.|. |.:.|.   :..|.|.:.|..||.|::....:..|.:
Zfish   123 EIIEAIYKMVGTV---IMMKMNEDGLTPEQRVDK---IFSKMDKNNDDQISLEEFKEAAKSDPSI 181

  Fly   190 VEFL 193
            |..|
Zfish   182 VLLL 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sowiNP_649671.2 EF-hand_7 114..179 CDD:463900 22/76 (29%)
vsnl1aNP_001007367.1 FRQ1 41..177 CDD:444056 28/141 (20%)

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