DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sowi and chp1

DIOPT Version :9

Sequence 1:NP_649671.2 Gene:sowi / 40809 FlyBaseID:FBgn0037460 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_956009.1 Gene:chp1 / 325361 ZFINID:ZDB-GENE-030131-4086 Length:194 Species:Danio rerio


Alignment Length:84 Identity:21/84 - (25%)
Similarity:39/84 - (46%) Gaps:7/84 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 RMRFAFEVYDTKGTGVIDREQVGTACEKFFYGEDEDELNELKADMTEFLMKKFDLDKDGVISYED 178
            ::.|||.:||......|.|:::.............||.....||.|   :::.|.:.|..||:.:
Zfish   113 KLLFAFRLYDLDRDDKISRDELLQVLRMMVGVNISDEQLGSIADRT---IQEADTNGDMCISFNE 174

  Fly   179 YSTVVE----QQPILVEFL 193
            ::.|:|    :|.:.:.||
Zfish   175 FTKVLEKVDVEQKMSIRFL 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sowiNP_649671.2 EF-hand_7 115..179 CDD:290234 16/63 (25%)
EFh 116..178 CDD:238008 16/61 (26%)
chp1NP_956009.1 FRQ1 1..181 CDD:227455 17/70 (24%)
EFh 113..179 CDD:238008 16/68 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0034
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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